PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78698.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 158aa MW: 17513.8 Da PI: 4.8301 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 16 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr++k +g+Wv+eIr p gk++r +lg++ t+e+Aa a++ a +l+g RWR78698.1 16 KYKGVRRRK-WGKWVSEIRLP---GKQTRLWLGSYATPEGAAVAHDTAVFYLRG 65 8*****998.**********8...556*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MSQIDEGCTS NSKQDKYKGV RRRKWGKWVS EIRLPGKQTR LWLGSYATPE GAAVAHDTAV 60 FYLRGPSSMA NLNFPMFVPT FHRADMSPTS IQRAASDAGM AIDAQLVAAK GPENDTKLME 120 GSVFQGPECL DWEERAREVN EGQALDLDIS VDDMEICI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 24 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 4e-40 | ERF family protein |