PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78657.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 391aa MW: 43923.5 Da PI: 9.424 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 76.9 | 2e-24 | 14 | 79 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL ll+++flk + + +++ l+e+a +L v +rRRiYDi+NVLe++++++kk+kn+++wkg RWR78657.1 14 RKEKSLSLLCTNFLKHCDRDGVETIGLDEAAAKL---GV--ERRRIYDIVNVLESVGVLSKKAKNQYSWKG 79 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 71.6 | 8.8e-23 | 161 | 245 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +++ ++vtl+e+a+ L+ + + k+RR+YDi+NVL++lnliek ++++++rw g RWR78657.1 161 RKEKSLGLLTQNFVKLFLTANVDTVTLDEAARLLLGDsngssmltnNSAAKVRRLYDIANVLTSLNLIEKtqqieTRRPAFRWLG 245 79*******************************************977789*******************999999999999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence |
MSSSSANRDH TYCRKEKSLS LLCTNFLKHC DRDGVETIGL DEAAAKLGVE RRRIYDIVNV 60 LESVGVLSKK AKNQYSWKGF EGIPKALEEL QGKALRETCG HSAVNSYDCT KGLDDDGNAE 120 DENLLVPSRG ELRRECSNLS SDLNGDSLSC SHSSKVKADN RKEKSLGLLT QNFVKLFLTA 180 NVDTVTLDEA ARLLLGDSNG SSMLTNNSAA KVRRLYDIAN VLTSLNLIEK TQQIETRRPA 240 FRWLGYNGKP DNAATFSTRA PNDQSKKRVF GSDVTNLDLV KRRPICTMDE KPIRVQMKSK 300 DPSAQKQSNQ MQQQQPSSKG YDFGPFRPVL QDREKAMKST QNCKAMASSH RPQYRNQALS 360 ELFAHYSEAW KSWYMEVTQV NNLKPERKAI H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-101 | E2F/DP family protein |