PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78651.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 352aa MW: 40004.1 Da PI: 7.3586

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.8	2.2e-49	16	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eel+ +yL++kv+gk++++ e i+ +d+y+++Pw+Lp ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ + + RWR78651.1 16 MPGFRFHPTEEELIEFYLRRKVQGKRFNV-ELITFLDLYRYDPWELPPLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEDFRPI 113 79*************************.89**********96666799***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy g+apkg +t+W+m+eyrl RWR78651.1 114 GLKKTLVFYAGKAPKGIRTSWIMNEYRL 141 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MNHNDERDNH EHDVVMPGFR FHPTEEELIE FYLRRKVQGK RFNVELITFL DLYRYDPWEL 60 PPLAAIGEKE WYFYVPRDRK YRNGDRPNRV TTSGYWKATG ADRMIRTEDF RPIGLKKTLV 120 FYAGKAPKGI RTSWIMNEYR LPQHETDQYQ KAEISLCRVY KRAGVEDHCP LPNSLSSKPS 180 SSRGVESKKK SSMGLQAITP SSQSPGEHSS SLEIETTQEE SSIDTINTRT TLGLPSCRGY 240 GGIAPITPIG SSSMEVDGNL LHHPKLVGSS FPTCTPFPPS SSMPMIAADE LHRLVDYQPI 300 YAHQTSQIFP SPTSQLPSLG LSTLPNSLTT FSDKLWEWNP IPDANRDYTT FK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MNHNDERDNH EHDVVMPGFR FHPTEEELIE FYLRRKVQGK RFNVELITFL DLYRYDPWEL  60
PPLAAIGEKE WYFYVPRDRK YRNGDRPNRV TTSGYWKATG ADRMIRTEDF RPIGLKKTLV  120
FYAGKAPKGI RTSWIMNEYR LPQHETDQYQ KAEISLCRVY KRAGVEDHCP LPNSLSSKPS  180
SSRGVESKKK SSMGLQAITP SSQSPGEHSS SLEIETTQEE SSIDTINTRT TLGLPSCRGY  240
GGIAPITPIG SSSMEVDGNL LHHPKLVGSS FPTCTPFPPS SSMPMIAADE LHRLVDYQPI  300
YAHQTSQIFP SPTSQLPSLG LSTLPNSLTT FSDKLWEWNP IPDANRDYTT FK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-105	NAC family protein