PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78594.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 424aa MW: 46866.2 Da PI: 6.1962

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94	1.1e-29	183	242	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK k +++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ RWR78594.1 183 MNDGCQWRKYGQKIAKANPCPRAYYRCTVApGCPVRKQVQRCMEDMSILITTYEGTHNHP 242 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MLQIDLSLKI TDEDNEEGVK EEQGEEEKKK KIIKLCVLQT EMNRMKEENK VLRKVVEETM 60 RDYYDLQMKF SVIQNNGQGN DYPISLSLEN EDGKKGANEG IDTNNQLPQV DETREADLGL 120 SLKLHSQRDQ YEGQEKEEKK TCVPNDNKIQ KSELGGITSH TASPAANRKS RVSVRARCDA 180 PTMNDGCQWR KYGQKIAKAN PCPRAYYRCT VAPGCPVRKQ VQRCMEDMSI LITTYEGTHN 240 HPLPVGATAM ASTTSAAATF MLLSGQDSTS PTSQGHSSYP NAYAINTSPF SSSVSNIINP 300 TPPRGFFLDH QQQLTSLDPS HSTLKFNYPW AHNSTIYPNA PATTSDSNNF HFPGPWGLDD 360 QRSRDVEEGK FLAENASGVT LDPKFAVAVA AAISSFISKE SQTAHTTGPA LGFMEGERAS 420 SSRQ

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MLQIDLSLKI TDEDNEEGVK EEQGEEEKKK KIIKLCVLQT EMNRMKEENK VLRKVVEETM  60
RDYYDLQMKF SVIQNNGQGN DYPISLSLEN EDGKKGANEG IDTNNQLPQV DETREADLGL  120
SLKLHSQRDQ YEGQEKEEKK TCVPNDNKIQ KSELGGITSH TASPAANRKS RVSVRARCDA  180
PTMNDGCQWR KYGQKIAKAN PCPRAYYRCT VAPGCPVRKQ VQRCMEDMSI LITTYEGTHN  240
HPLPVGATAM ASTTSAAATF MLLSGQDSTS PTSQGHSSYP NAYAINTSPF SSSVSNIINP  300
TPPRGFFLDH QQQLTSLDPS HSTLKFNYPW AHNSTIYPNA PATTSDSNNF HFPGPWGLDD  360
QRSRDVEEGK FLAENASGVT LDPKFAVAVA AAISSFISKE SQTAHTTGPA LGFMEGERAS  420
SSRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-67	WRKY family protein