PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 594aa MW: 68322.4 Da PI: 5.7642 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.1 | 2.1e-54 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv++yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v+s + RWR78548.1 6 LPPGFRFHPTDEELVDYYLKRKINGRKIEL-EIIPEVDLYKFEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATRAGYWKATGKDRKVVS-HM 102 79****************************.99**************95334455777**************************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg kktLv+y grap+g++tdWvmhey l RWR78548.1 103 RAVGSKKTLVYYGGRAPHGVRTDWVMHEYLL 133 9****************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence |
MAPVTLPPGF RFHPTDEELV DYYLKRKING RKIELEIIPE VDLYKFEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATRAGYWK ATGKDRKVVS HMRAVGSKKT LVYYGGRAPH 120 GVRTDWVMHE YLLDEKECET GSGLQDAYAL CRVFKKSPTV EQRGSTPLRE HSQWIPNNHS 180 SIMELSSESG GGVEITDYFY PTETCSSDII RDASFDMNAQ RDWKCMQFLA EEVLGSFNPT 240 FQNAGSMAYV PSEVDIALEC AKLKRRLALP PLEMDDLPQI KLTDPKFQHF ECFQGDPKEV 300 DISQEILLVA RSSQELLNQS HHQDKWEGHG HHMQEFSSLS EQGIVRRVQA NGHSQVSEMG 360 TSSFTERSHG LEENTRFIKI SDLEEELNRE HKVENLQGVR TSGINLGETF EDHKPLLTEG 420 RSEYSRCEVT GYKGENNPHN NLKSFNDTEN TPNCLEHQSS YFPHGFINDS TNEIFLEEGD 480 MDEFDCTSIF DTYEKVEVNH GFFVSSRNVA ETFFHHIEHS ERVVVHLDPS EEQDFAKPKA 540 EEVRKGLNKS SFYAKFKAFT KDKLIGIKIS SRPPRKPFPV RETMNSFASI MSLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-120 | NAC family protein |