PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78524.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 287aa MW: 32568.5 Da PI: 6.3778

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.5	1.7e-21	104	164	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ RWR78524.1 104 RQRWTPTPVQLQILESIFEQgNGTPSKQRIKEITSELtqhgQISETNVYNWFQNRRARSKR 164 89***************99************************************97 PP
2	Wus_type_Homeobox	101.1	7.8e-33	103	166	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq RWR78524.1 103 ARQRWTPTPVQLQILESIFEQGNGTPSKQRIKEITSELTQHGQISETNVYNWFQNRRARSKRKQ 166 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MEMGVVGNGR KEEEEEEIVQ KKKKRMQQEQ DQQQQQGVMY VKVMTDEQLE VLRQQISAYA 60 TICEQLVELH KTLTAQHDSL SGMRLGNVYC DHLMTPGGHK ITARQRWTPT PVQLQILESI 120 FEQGNGTPSK QRIKEITSEL TQHGQISETN VYNWFQNRRA RSKRKQLQPI SNNGESEVET 180 ETDSPKEKKA KAEDMHPHEK PAPRVDDHCF QTAEISSDVH PLDPQPSKAQ VAFPLNDTSK 240 SAGSMGHGPF FESMLSNPRI DHHLMGKMEV PGSYSPFRSG EGYDMLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	166	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-78	WOX family protein