PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78501.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Nin-like

Protein Properties

Length: 865aa MW: 96389.1 Da PI: 7.9304

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.4	1.4e-28	543	593	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ RWR78501.1 543 EKTVSLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 593 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence
MDFGIMDDLL LGGCWLESMN CSYHVQEGAK SSGQSDSYLA EEGRNLNGGG MINPSSELSR 60 RWWIQPRPNP GAAASVRERL VHVLNHIKES TKDGDVLIQI WAPIKKGGRK VLTTCGQPFS 120 LNPHCQRLVN YRMVSTNYLF SAEEDSDMVA GLPGRVFLGR LPEWTPDVRY FSSEEYLRVD 180 YAHHYDIRGS LVLPFFERGS HACLGVVEVV MTTQKINYHP DLENICSALQ ASNTSYQVVL 240 PEILEIMRAV CETHQLPLAQ TWVPCIQQGK KGSRHTDENY VDCVSTVDAA CFVANPHFWG 300 FHDACSEHHL FRGQGVVGKA FATNQLCFSM DITALSKAEY PLSHHARMFG LRAAVAIRLR 360 TIYTRTTDYV LEFFLPVDCS NNEEQKLMAQ LTSLRVVTEK ELDNETDFSI NKVAPSALAK 420 PISAGRLNNN KMSEAGIDPS IGTSGEKSLW TPSFTEAQQK GKNILHPAPV PMESQKQGSK 480 DFDVTGHWDN PELVLHPRRI LSNSKQHQQG LCKENVEGDD SSFGKPSIES TANAVEKRRI 540 KTEKTVSLQV LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GITRWPSRKI KKVGNSLRKL 600 QVVIDSVQGA EGVVQISPVY ANFPKTYGSD FPSQNLSRSD MLSTLEQTGH PKSSTRQPKG 660 VFSIGSPLEN SQPLHAKSSS SLSCSTAVQS QHHATQLFGS KDATKAESKS RMLKRACSEA 720 ELHALSKREE TRPPSRSHSH KSLCERPSFG SSSSLRESIS LPQDCNSVRV KVAYGEEKVR 780 FRLQPSWGFQ DLMLEIASRF NIDDANAIDL KYLDDDSEWV MLKCDADLQE CKDLYKSSRM 840 HLIKLTVDFV SQPDTRNSLG NTALS

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence

MDFGIMDDLL LGGCWLESMN CSYHVQEGAK SSGQSDSYLA EEGRNLNGGG MINPSSELSR  60
RWWIQPRPNP GAAASVRERL VHVLNHIKES TKDGDVLIQI WAPIKKGGRK VLTTCGQPFS  120
LNPHCQRLVN YRMVSTNYLF SAEEDSDMVA GLPGRVFLGR LPEWTPDVRY FSSEEYLRVD  180
YAHHYDIRGS LVLPFFERGS HACLGVVEVV MTTQKINYHP DLENICSALQ ASNTSYQVVL  240
PEILEIMRAV CETHQLPLAQ TWVPCIQQGK KGSRHTDENY VDCVSTVDAA CFVANPHFWG  300
FHDACSEHHL FRGQGVVGKA FATNQLCFSM DITALSKAEY PLSHHARMFG LRAAVAIRLR  360
TIYTRTTDYV LEFFLPVDCS NNEEQKLMAQ LTSLRVVTEK ELDNETDFSI NKVAPSALAK  420
PISAGRLNNN KMSEAGIDPS IGTSGEKSLW TPSFTEAQQK GKNILHPAPV PMESQKQGSK  480
DFDVTGHWDN PELVLHPRRI LSNSKQHQQG LCKENVEGDD SSFGKPSIES TANAVEKRRI  540
KTEKTVSLQV LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GITRWPSRKI KKVGNSLRKL  600
QVVIDSVQGA EGVVQISPVY ANFPKTYGSD FPSQNLSRSD MLSTLEQTGH PKSSTRQPKG  660
VFSIGSPLEN SQPLHAKSSS SLSCSTAVQS QHHATQLFGS KDATKAESKS RMLKRACSEA  720
ELHALSKREE TRPPSRSHSH KSLCERPSFG SSSSLRESIS LPQDCNSVRV KVAYGEEKVR  780
FRLQPSWGFQ DLMLEIASRF NIDDANAIDL KYLDDDSEWV MLKCDADLQE CKDLYKSSRM  840
HLIKLTVDFV SQPDTRNSLG NTALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein