PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 281aa MW: 32112 Da PI: 6.5839 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 7.7e-18 | 79 | 131 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k RWR78406.1 79 KKRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 131 556899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.7 | 1.1e-41 | 77 | 169 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lk++++a+k++n++L++++++L++e+++ RWR78406.1 77 EKKKRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKKQFEAVKADNDALHAQNKKLQAEIMA 169 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MTCNEMAFFP SNFILPTHEQ DHPSTSLNQI ISSCTPQDFR GVASLLGKRS LSFSRIEGCE 60 EMNGDDDLSD DCSQAGEKKK RLNMEQVKTL EKNFELGNKL EPERKMQLAR ALGLQPRQIA 120 IWFQNRRARW KTKQLEKDYD VLKKQFEAVK ADNDALHAQN KKLQAEIMAL KGRETTEPIN 180 LNKETEGSSS NRSENSSDIN LDISRTSAID SPQATHPNRP LFPSSLRPTP ATHHLLQNST 240 RPELQCPKIE HPVQEESFCN MFMGMDDHSG LWPWSEHHNF H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 134 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 2e-98 | HD-ZIP family protein |