PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78379.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 373aa MW: 41412.5 Da PI: 6.7028

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.9e-32	29	83	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFv+av++LGG++kAtPkt++++m+v+ Ltl h+kSHLQkYRl RWR78379.1 29 KPRLKWTPELHQRFVDAVSKLGGIQKATPKTVMKVMGVPKLTLFHLKSHLQKYRL 83 79****************************************************8 PP
2	Myb_DNA-binding	57.9	2.3e-18	31	82	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++vdav +lGg t+kt+++ mg ++tl ++ks++qky+ RWR78379.1 31 RLKWTPELHQRFVDAVSKLGGIqkaTPKTVMKVMGvPKLTLFHLKSHLQKYR 82 89****************88**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MMQNQVENKL SLVHGEDDMG VLVLSADAKP RLKWTPELHQ RFVDAVSKLG GIQKATPKTV 60 MKVMGVPKLT LFHLKSHLQK YRLKNQQSGT SSDNKEADCA VAALGDTEIR GVHVHGENFE 120 KNHIQINESL QIAKALQRQL EVQQSLHEQI EVQRRLQLRI EAQGKYLQSV LKKAQEMLAG 180 CNISSLGLEA AKEELSELVS LANANSPSGP SSSLSELTEM SDLQMQKQGT RPAGNCFLPH 240 QPHLTDSSMD SCLTSSESSE RKDEKLQSSH VNSAYDAERS GACALKPIEI NSNNNNLSMI 300 HLSSRPSGGK RTRRSDSSDD TGTEKQISEP LPYQENFDNH LKRFRLSGDI DLNSQYQSEM 360 DVGGQKLDLN CWI

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MMQNQVENKL SLVHGEDDMG VLVLSADAKP RLKWTPELHQ RFVDAVSKLG GIQKATPKTV  60
MKVMGVPKLT LFHLKSHLQK YRLKNQQSGT SSDNKEADCA VAALGDTEIR GVHVHGENFE  120
KNHIQINESL QIAKALQRQL EVQQSLHEQI EVQRRLQLRI EAQGKYLQSV LKKAQEMLAG  180
CNISSLGLEA AKEELSELVS LANANSPSGP SSSLSELTEM SDLQMQKQGT RPAGNCFLPH  240
QPHLTDSSMD SCLTSSESSE RKDEKLQSSH VNSAYDAERS GACALKPIEI NSNNNNLSMI  300
HLSSRPSGGK RTRRSDSSDD TGTEKQISEP LPYQENFDNH LKRFRLSGDI DLNSQYQSEM  360
DVGGQKLDLN CWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	1e-66	G2-like family protein