PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78377.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Dof

Protein Properties

Length: 494aa MW: 53904.6 Da PI: 6.5098

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	120	180	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s+ RWR78377.1 120 PDKILPCPRCNSLDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNST 180 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MSETRDPAIK LFGMTIPVPT HGAGEGIGTE DGGASPDGNN KSKEEEEEKD LSNETTEDKE 60 KHEAIQISED PAEPGTSSGI NESPKPPSID QETSTATEAT EVEKEQTDTS ISKEKTLKKP 120 DKILPCPRCN SLDTKFCYYN NYNVNQPRHF CKNCQRYWTA GGTMRNVPVG AGRRKNKNST 180 SHYRHLTVPE AFQTVRTNTS ESIDSPQLKP NGSVLSFGLD APLCESMASA LNLAEKTMQN 240 SHRNGFHTTD HEEARFPGSC GRENAEEHSH SSASAVTASK NSMEEGKPLN LQEPATLDRQ 300 VFPPRVQYFA GAPWNNPWHS AQWRSPLPPP PLQTLPPPPA FCASSFPISF YPATPYWGCA 360 MPGSWTAPWP PPLASSPNTG SSGSGSSSPK LGKHSREGNT CDAENGDTSK QSNSERCLWI 420 PKTLRIDDPD EAAKSSIWAT LRIKNNKANA IKGGGLFKAF QPKTDDKNHM MDTPKVLHAN 480 PAALSRSLNF QESS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MSETRDPAIK LFGMTIPVPT HGAGEGIGTE DGGASPDGNN KSKEEEEEKD LSNETTEDKE  60
KHEAIQISED PAEPGTSSGI NESPKPPSID QETSTATEAT EVEKEQTDTS ISKEKTLKKP  120
DKILPCPRCN SLDTKFCYYN NYNVNQPRHF CKNCQRYWTA GGTMRNVPVG AGRRKNKNST  180
SHYRHLTVPE AFQTVRTNTS ESIDSPQLKP NGSVLSFGLD APLCESMASA LNLAEKTMQN  240
SHRNGFHTTD HEEARFPGSC GRENAEEHSH SSASAVTASK NSMEEGKPLN LQEPATLDRQ  300
VFPPRVQYFA GAPWNNPWHS AQWRSPLPPP PLQTLPPPPA FCASSFPISF YPATPYWGCA  360
MPGSWTAPWP PPLASSPNTG SSGSGSSSPK LGKHSREGNT CDAENGDTSK QSNSERCLWI  420
PKTLRIDDPD EAAKSSIWAT LRIKNNKANA IKGGGLFKAF QPKTDDKNHM MDTPKVLHAN  480
PAALSRSLNF QESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	6e-84	Dof family protein