PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78343.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 633aa MW: 69682.4 Da PI: 4.5537

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	58	184	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrFhPtdeelv +yLk+k+ + +++l ++i evd+yk++Pw+Lp k +++++k+wyfFs+rd+ky++g r+nr tk gyWk+tgkd+++ + + + RWR78343.1 58 PPGFRFHPTDEELVLYYLKRKICRGRFKL-SMIGEVDVYKCDPWELPeKsLLQTGDKQWYFFSPRDRKYPNGVRSNRGTKCGYWKTTGKDRNISR-NAR 154 8**************************.89**********9535678899*********************************99.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vglkktLvfy+grapkge+tdWvmhey++ RWR78343.1 155 TVGLKKTLVFYRGRAPKGERTDWVMHEYTI 184 **************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MGTMSESISV SVSNPLGLGL GRDGSAVVVV GGPNSSSSSS KGGFTGSNNN DCDDHRWPPG 60 FRFHPTDEEL VLYYLKRKIC RGRFKLSMIG EVDVYKCDPW ELPEKSLLQT GDKQWYFFSP 120 RDRKYPNGVR SNRGTKCGYW KTTGKDRNIS RNARTVGLKK TLVFYRGRAP KGERTDWVMH 180 EYTIAKEELH NCHTVQDSYA LYKIYQKSGP GPKNGEQYGA PFREEEWLDD DPFHDRLGNP 240 TSADNLLPLP EVTDGFSPGL PLHDVPVPEV TDGFSPGLSL HDVEEVWAIM ADDSQVNQQR 300 DNSLSYASEA DGKEGMQSSV VGSLLGEPIS AGTSEIWQSH EWVYQQTSFQ IAQPEGSLLQ 360 PPEVSEVTSS PHQLEEEPNT AEGDFMELSD LMDPELVFSS LGRGSISMSN PFLDQDGLDD 420 FDFYFDAPMH LPEEIVPPEG TALQPYLDRF SGNVAGQLDY HLPASFDDDE NHCLAASVAS 480 QLWTHEHKYG VFSPAESSQV VLAPSASGVV QDSSNSVNIN EHMGNQGSYA GDPPVPWFTS 540 AINSLLESVP TNPASASENA LISRAFERMS SFGAVRIGTR EAGVAADTTR REGRNGSFLF 600 LSFLGALWAI LWVLMIGTMV KVFKVIVGRF VAS

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MGTMSESISV SVSNPLGLGL GRDGSAVVVV GGPNSSSSSS KGGFTGSNNN DCDDHRWPPG  60
FRFHPTDEEL VLYYLKRKIC RGRFKLSMIG EVDVYKCDPW ELPEKSLLQT GDKQWYFFSP  120
RDRKYPNGVR SNRGTKCGYW KTTGKDRNIS RNARTVGLKK TLVFYRGRAP KGERTDWVMH  180
EYTIAKEELH NCHTVQDSYA LYKIYQKSGP GPKNGEQYGA PFREEEWLDD DPFHDRLGNP  240
TSADNLLPLP EVTDGFSPGL PLHDVPVPEV TDGFSPGLSL HDVEEVWAIM ADDSQVNQQR  300
DNSLSYASEA DGKEGMQSSV VGSLLGEPIS AGTSEIWQSH EWVYQQTSFQ IAQPEGSLLQ  360
PPEVSEVTSS PHQLEEEPNT AEGDFMELSD LMDPELVFSS LGRGSISMSN PFLDQDGLDD  420
FDFYFDAPMH LPEEIVPPEG TALQPYLDRF SGNVAGQLDY HLPASFDDDE NHCLAASVAS  480
QLWTHEHKYG VFSPAESSQV VLAPSASGVV QDSSNSVNIN EHMGNQGSYA GDPPVPWFTS  540
AINSLLESVP TNPASASENA LISRAFERMS SFGAVRIGTR EAGVAADTTR REGRNGSFLF  600
LSFLGALWAI LWVLMIGTMV KVFKVIVGRF VAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-111	NAC family protein