PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78225.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 502aa    MW: 56262.7 Da    PI: 7.1011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.21.3e-35461881128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgyW 83 
                 lp+G++F+Ptd+el+ e+L++kve+++      ++++  +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r+++        + +W
  RWR78225.1  46 LPAGVKFDPTDQELI-EHLEAKVESEQskshplIDEFIpTIEGEeGICYTHPEKLP-GVTKDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETRW 142
                 799************.99*******996665443332233655557**********.555667799******************73334555544778* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  RWR78225.1 143 HKTGKTRPVIV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 188
                 ***********.999***********5547999999*********98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
MSKSSIGSIS SSDLIDAKLE EHQMCGSKQC PSCGHKLERK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVESE QSKSHPLIDE FIPTIEGEEG ICYTHPEKLP GVTKDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VIVNGKQKGC KKILVLYTNF GKHRKPEKTN  180
WVMHQYHLGQ LEEEKEGELV VSKIFYQTQP RQCNLSERGA TVEGTDHRRE IGGGSCSSKE  240
VSHGEDLSGA VAGISSYTAI DIQQLKADHF SFAPFKKSFD EVGMGEGPKG REASGRTCEE  300
HEEHEHHQRP HHMTHDHHQA HQPVSSAASY VSRPSNPIST IISPPLHQTS SIFLDDPYQV  360
PRMILQGEKF QQHHHQKLGE RSASGLEELI MGCTSADMKE ESSMANPQET EWLKYSYWPV  420
PDNPDHHGHG SGGSGVPRSF FSDRTSSPIF FSDDRDPPAN LFAQQRRSHE ASSPIFFSGD  480
CDPPANLTIF ARGIRKKRDN AK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-146NAC family protein