PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 502aa MW: 56262.7 Da PI: 7.1011 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 114.2 | 1.3e-35 | 46 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgyW 83 lp+G++F+Ptd+el+ e+L++kve+++ ++++ +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++ + +W RWR78225.1 46 LPAGVKFDPTDQELI-EHLEAKVESEQskshplIDEFIpTIEGEeGICYTHPEKLP-GVTKDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETRW 142 799************.99*******996665443332233655557**********.555667799******************73334555544778* PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l RWR78225.1 143 HKTGKTRPVIV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 188 ***********.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence |
MSKSSIGSIS SSDLIDAKLE EHQMCGSKQC PSCGHKLERK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVESE QSKSHPLIDE FIPTIEGEEG ICYTHPEKLP GVTKDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VIVNGKQKGC KKILVLYTNF GKHRKPEKTN 180 WVMHQYHLGQ LEEEKEGELV VSKIFYQTQP RQCNLSERGA TVEGTDHRRE IGGGSCSSKE 240 VSHGEDLSGA VAGISSYTAI DIQQLKADHF SFAPFKKSFD EVGMGEGPKG REASGRTCEE 300 HEEHEHHQRP HHMTHDHHQA HQPVSSAASY VSRPSNPIST IISPPLHQTS SIFLDDPYQV 360 PRMILQGEKF QQHHHQKLGE RSASGLEELI MGCTSADMKE ESSMANPQET EWLKYSYWPV 420 PDNPDHHGHG SGGSGVPRSF FSDRTSSPIF FSDDRDPPAN LFAQQRRSHE ASSPIFFSGD 480 CDPPANLTIF ARGIRKKRDN AK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-146 | NAC family protein |