PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77403.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 306aa    MW: 34549.5 Da    PI: 10.0536
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.62.3e-34101022103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   F+ k y++++d+++++li w + +nsfvvld+  f++++Lp +Fkh+nf+SF+RQLn+YgF+kv+ ++         weF+h+sF +g+++ll++i 
    RWR77403.1  10 FVLKAYQMVSDSSTDDLICWGRGNNSFVVLDPLAFSQRLLPIHFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFAHESFLRGQRHLLKNIT 97 
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+ks+
    RWR77403.1  98 RRKSQ 102
                   **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEACDLIAPF VLKAYQMVSD SSTDDLICWG RGNNSFVVLD PLAFSQRLLP IHFKHNNFSS  60
FIRQLNTYGF RKVDPDRWEF AHESFLRGQR HLLKNITRRK SQRNPISLHE DIKQEKSVLL  120
ELTRLKQEQR TLNEEVEGMN RRLQATEKKP QQMMAFLAKV VEDPDFLSRM LLEKKASEQL  180
VEKKKRFRIT STSTVEQSKD KKDIEGVEAT TTAIGPLVMN RSLASDGDLY TLVKSATAKT  240
GTGNSATAAN ARIGTGWPMG TTSQHNGSNQ SKRPFFAELG GLESSPCWGC TTKVPHRLEM  300
GKIMGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.16e-81HSF family protein