PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77301.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 398aa MW: 44300.6 Da PI: 6.7846

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.9	9.8e-33	255	310	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ RWR77301.1 255 KARRCWSPELHRRFVNALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 310 68****************************************************97 PP
2	Myb_DNA-binding	44.5	3.5e-14	257	308	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m g+t ++ks++qky+ RWR77301.1 257 RRCWSPELHRRFVNALQQLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 308 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MGSLSELSLD FKPSYTPKTI SEFLREVSMI GDCSKRLLKI EDFLKCLEEE RKKIDAFKRE 60 LPLCMLLMND AIETVKEEEK QCRLLAAAKA TPVLEEFMPI QSKIEEDGGS KVEKDCRDKM 120 NWMSSAQLWS DNNDNSNNNI KNKSVDDVKE KTEESERSAI ENPFPLCKYQ SNEGAFLPFK 180 GFSGFTSSAR KEEKEVVPLP GISLLSTEVK NPNADSGSSS LNSKSSSRAA ASSSSSAAVN 240 FQSNLQQQQQ QAPRKARRCW SPELHRRFVN ALQQLGGSQV ATPKQIRELM KVDGLTNDEV 300 KSHLQKYRLH TRRLPTSTSV PANQQVIVMG RIWSPHDHYQ TSKQSTSQSG SPQGPLQLAG 360 ATRGISTTGG DSGEEEDGKS ESYSWKGHLP RSGEEETE

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MGSLSELSLD FKPSYTPKTI SEFLREVSMI GDCSKRLLKI EDFLKCLEEE RKKIDAFKRE  60
LPLCMLLMND AIETVKEEEK QCRLLAAAKA TPVLEEFMPI QSKIEEDGGS KVEKDCRDKM  120
NWMSSAQLWS DNNDNSNNNI KNKSVDDVKE KTEESERSAI ENPFPLCKYQ SNEGAFLPFK  180
GFSGFTSSAR KEEKEVVPLP GISLLSTEVK NPNADSGSSS LNSKSSSRAA ASSSSSAAVN  240
FQSNLQQQQQ QAPRKARRCW SPELHRRFVN ALQQLGGSQV ATPKQIRELM KVDGLTNDEV  300
KSHLQKYRLH TRRLPTSTSV PANQQVIVMG RIWSPHDHYQ TSKQSTSQSG SPQGPLQLAG  360
ATRGISTTGG DSGEEEDGKS ESYSWKGHLP RSGEEETE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-61	G2-like family protein