PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76869.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 700aa MW: 80242.3 Da PI: 5.296

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	135.5	3.5e-42	58	183	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG++FhP+d+el+ +yL +k+++kkl+ ++ik+v + +++P+ L +k+k e++ewyfF++r++ky++g+r+nra+ sgyWkatg d +++s +ge+ RWR76869.1 58 PPGYHFHPNDDELILNYLLPKLQNKKLPY-NHIKDVVLADYDPEVLTAKYKCiEKSEWYFFTPRERKYKKGSRPNRAAGSGYWKATGVDIPIKS-NGET 154 9**************************.88**********9655543677***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg kk+Lvfy+g+ p+g+k++W+++eyr+ RWR76869.1 155 VGFKKSLVFYRGKPPNGVKSNWIVNEYRI 183 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MKKERNKVEF GSMEGCSSVG DGNSKKRAKK DQEDAVEINQ VMENNPPPDN EPPPIYFPPG 60 YHFHPNDDEL ILNYLLPKLQ NKKLPYNHIK DVVLADYDPE VLTAKYKCIE KSEWYFFTPR 120 ERKYKKGSRP NRAAGSGYWK ATGVDIPIKS NGETVGFKKS LVFYRGKPPN GVKSNWIVNE 180 YRIKAGVFEG TSRERDMSSM RLDDWVLCKI YKKTSSKNVW KESPISSSSR DYEEESPSAC 240 PRDHENESLI ASQSDCENKS PIAYQRDHEN DYLIACQRDY GDEKMMKVME ESSHGNKMTT 300 PDISSYWSHG NNMTTPDIIS SYWYGDEKMN MVMGESSYGS KMITTEITSS KKVSKESSFS 360 PSSRDYEKES PITCPGDHEN ESLIACQRDH ENKSPIAYQR DQFHNDSLIA CKRAYGDGKM 420 KMVMEESSHG NKTINTPEFK SPIAYQRDQF HNESLIVCKR DSGDEKKKMV MEESSHGNKT 480 ISTPEFSSRT FDWSGDEKMN MEMENSSYGN QLITPEIMSE IFDWNSISQM LTDESDYGFD 540 LFNELTSNSY YSNAYDPYML DCPQPQPQPQ PQLQPQPQHQ PQPQPQQLLS AVPTIHSSNT 600 LGQFDLTSNS YYSNAYDPYM LDCPQPQPQP QPQPQPQLQP QPQHQPQPQR QQLLSAVPTI 660 HSSNTLGQFD LGSKDEVEDM IQIEILKQQL DHLRRRGPML

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MKKERNKVEF GSMEGCSSVG DGNSKKRAKK DQEDAVEINQ VMENNPPPDN EPPPIYFPPG  60
YHFHPNDDEL ILNYLLPKLQ NKKLPYNHIK DVVLADYDPE VLTAKYKCIE KSEWYFFTPR  120
ERKYKKGSRP NRAAGSGYWK ATGVDIPIKS NGETVGFKKS LVFYRGKPPN GVKSNWIVNE  180
YRIKAGVFEG TSRERDMSSM RLDDWVLCKI YKKTSSKNVW KESPISSSSR DYEEESPSAC  240
PRDHENESLI ASQSDCENKS PIAYQRDHEN DYLIACQRDY GDEKMMKVME ESSHGNKMTT  300
PDISSYWSHG NNMTTPDIIS SYWYGDEKMN MVMGESSYGS KMITTEITSS KKVSKESSFS  360
PSSRDYEKES PITCPGDHEN ESLIACQRDH ENKSPIAYQR DQFHNDSLIA CKRAYGDGKM  420
KMVMEESSHG NKTINTPEFK SPIAYQRDQF HNESLIVCKR DSGDEKKKMV MEESSHGNKT  480
ISTPEFSSRT FDWSGDEKMN MEMENSSYGN QLITPEIMSE IFDWNSISQM LTDESDYGFD  540
LFNELTSNSY YSNAYDPYML DCPQPQPQPQ PQLQPQPQHQ PQPQPQQLLS AVPTIHSSNT  600
LGQFDLTSNS YYSNAYDPYM LDCPQPQPQP QPQPQPQLQP QPQHQPQPQR QQLLSAVPTI  660
HSSNTLGQFD LGSKDEVEDM IQIEILKQQL DHLRRRGPML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	9e-49	NAC family protein