PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 96aa MW: 10949.3 Da PI: 4.4067 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100 | 3.5e-31 | 16 | 96 | 1 | 82 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 lppGf+FhPtdee+v+ yL +kv ++++ + ++i evd++k+ePwdLp k+k +e+ewyfF++rd+ky+tg r+nrat++gy RWR76835.1 16 LPPGFKFHPTDEEIVSSYLSEKVVNNSFVC-RAIGEVDLNKCEPWDLPGKAKMGENEWYFFCQRDRKYPTGMRTNRATDAGY 96 79*************************999.89***************99999**************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MEDVSGLTIG EDCMDLPPGF KFHPTDEEIV SSYLSEKVVN NSFVCRAIGE VDLNKCEPWD 60 LPGKAKMGEN EWYFFCQRDR KYPTGMRTNR ATDAGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 3e-48 | NAC family protein |