PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76470.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 742aa    MW: 80240.4 Da    PI: 6.5126
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.91.1e-28211264155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++W+ eLH++Fv av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  RWR76470.1 211 KPRVVWSVELHQQFVAAVNQL-GIEKAVPKKILELMNVPGLTRENVASHLQKYRL 264
                 79*******************.********************************8 PP
2Myb_DNA-binding41.92.2e-13213263148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++qky+
       RWR76470.1 213 RVVWSVELHQQFVAAVNQLGIEkaVPKKILELMNvPGLTRENVASHLQKYR 263
                      678***********************************************7 PP
3Response_reg77.35.4e-26331401108
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+p+ +++l+++l k +y ev++++++  al +l+e++  +Dl+l D+ mp+mdG++ll++i  e  +lp+i++++ + ++ + + +  Ga 
    RWR76470.1  33 VLVVDDDPICLKILERMLGKCRY-EVTTCSKAVVALSMLRERKdgFDLVLSDVYMPDMDGFKLLERIGLEM-DLPVIMMSSDDGKDVVMKGVTHGAC 127
                   89*********************.***************999999**********************6654.8************************ PP

                   EEEESS--HHHHH CS
  Response_reg  96 dflsKpfdpeelv 108
                   d+l Kp+ +e++ 
    RWR76470.1 128 DYLIKPVRIEAVK 140
                   *******999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    
MDNGGVGAPS SMTCSAPNRN GGDAAFDPTG LRVLVVDDDP ICLKILERML GKCRYEVTTC  60
SKAVVALSML RERKDGFDLV LSDVYMPDMD GFKLLERIGL EMDLPVIMMS SDDGKDVVMK  120
GVTHGACDYL IKPVRIEAVK NIWQHVVRKK NNERKELEQS GSVDDSDKPQ KPSDDADYAS  180
SASEACWRHP KKRKDEDEES EDREDSSTLK KPRVVWSVEL HQQFVAAVNQ LGIEKAVPKK  240
ILELMNVPGL TRENVASHLQ KYRLYLKRVS GVSQHPGGIN TPFVGAPEAT FGSISSLDEF  300
NFQALAASGQ LSQQNLMTLQ AGLGRTSSNA GIGISLADQM NLLNSNTQIA SSPKVKYDGQ  360
QLSSKQVNLL HGLPTNIEPK QLALLHQPIQ SVRNMESQVR EGNSGFLNLP STVPRTGSAH  420
GDAIHGHQNS SIMMQMTQHR PQFPLYQNQS QSQSQGQTQV DILQQSRPKG QLLNEMVSNH  480
SSGLPPSIAQ QIFPNDMASQ VLGRSGDVMN GRDAPNGIAS QVLGRSGDVM NGRGAPNDIA  540
SQALGRSGGV MNGRDAPYVT VSETLSVDFP ELSKNGFPLA STAGFSSFTP NGMFHEAMPM  600
KGSFGGLDNA TARGPRGLLL SYGHLSELSC SNLPYDPTHL LNPIKNAPDL RSVVLSHQGL  660
SAALTNGQNV NLCAGGKGMV LMRADGNRNL QSISQSHSNL PGDNSSGVKV ENVPNMSCES  720
TLLTEQYGQD DLMSAFFKQD FT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-116ARR-B family protein