PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 172aa MW: 19731.3 Da PI: 5.7587 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57 | 3.2e-18 | 79 | 131 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k RWR76156.1 79 KKRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 131 556899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 127.1 | 7.5e-41 | 77 | 167 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+kt qlEkdy++Lk++++a+k++n+++++++++L++e+ RWR76156.1 77 EKKKRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTNQLEKDYDVLKKQFEAVKADNDAFHSQNNKLQAEV 167 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MTCNEMAFFP SNFILPTHEQ DHPSTSLNQI ISSCTPQIFG GVASLLGKRS LSFSRIEGCE 60 EMDGDDDLSD DCSQAGEKKK RLNMEQVKTL EKNFELGNKL EPERKMQLAR ALGLQPRQIA 120 IWFQNRRARW KTNQLEKDYD VLKKQFEAVK ADNDAFHSQN NKLQAEVYID IC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 3e-69 | HD-ZIP family protein |