PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76116.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | GRAS | ||||||||
Protein Properties | Length: 156aa MW: 18362.1 Da PI: 6.9106 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 189.7 | 1.9e-58 | 2 | 151 | 225 | 374 |
GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323 d++L +++l Pkv+vv+eqe++hn+++++er+leal++y+alfd+l+++++r+s +rikvE++l g+ei+n++aceg er+erhe+le+W +rle+aG RWR76116.1 2 DNFLASLWGLLPKVMVVTEQESNHNGSTLMERLLEALYFYAALFDCLDSTVSRASMDRIKVEKMLYGEEIKNIIACEGGERKERHEKLERWIHRLEMAG 100 78************************************************************************************************* PP GRAS 324 FkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++ +ls + +qa++ll+ ++++gy+++ee+gs++++W+dr+L++vSaWr RWR76116.1 101 YERSQLSCYGLMQARRLLQSYGFEGYKIKEENGSFIICWHDRALFAVSAWR 151 **************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MDNFLASLWG LLPKVMVVTE QESNHNGSTL MERLLEALYF YAALFDCLDS TVSRASMDRI 60 KVEKMLYGEE IKNIIACEGG ERKERHEKLE RWIHRLEMAG YERSQLSCYG LMQARRLLQS 120 YGFEGYKIKE ENGSFIICWH DRALFAVSAW RCRRYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 7e-69 | GRAS family protein |