PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76003.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 339aa    MW: 38405 Da    PI: 7.1688
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.6e-05262284123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C +Cgk F  + + ++H +++
  RWR76003.1 262 FMCRKCGKAFAVRGDWRTHEKNC 284
                 89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MTDPYSNFFN RFFSFNPLYP HLTSSNPPPP PPHPSYSFHS NSNTTTTTYH FLPSAPPSPP  60
LREALPLLSL SPARHEEYPS CSAMEEEEGD DRTRERGERE KNFLSPADDD NDDAVTVALH  120
IGLPNPSAAD LLASRVSSTE MEEKEGESIP TGYPTGTLNK GQYWIPTPSQ ILIGPTQFSC  180
PVCCKTFNRY NNMQMHMWGH GSQYRRGPES LRGTQPTAML RLPCFCCAPG CRNNIDHPRS  240
KPLKDFRTLQ THYKRKHGIK PFMCRKCGKA FAVRGDWRTH EKNCGKLWYC ICGSDFKHKR  300
SLKDHIKAFG RGHAAYGIDC FEDEEEPASE IEQDNESLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-134C2H2 family protein