PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75894.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 553aa MW: 60010.7 Da PI: 4.8577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	45	92	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+d+vk++G g+W+++ ++ g+ R++k+c++rw ++l RWR75894.1 45 KGPWTATEDAILIDYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 92 79******************************************9986 PP
2	Myb_DNA-binding	51.8	1.9e-16	98	141	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l++++++++G++ W++ a++++ gRt++++k++w++ RWR75894.1 98 KGAFTAEEERLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 141 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MSHSKANDSD DGMLDQSDGM LDQSDSSSFD EESSKVAGGG TVLKKGPWTA TEDAILIDYV 60 KKHGEGNWNA VQKHSGLFRC GKSCRLRWAN HLRPNLKKGA FTAEEERLII ELHAKMGNKW 120 ARMAAHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPDVHL QGLSESQQNQ NIGELNSGDT 180 SHHDLLQAND FDIPDVIFDN LKGSSGAFCY SPVMPNVSVN SMLNQSLGSS QSFSFMPPTI 240 NHVKRLGESE TLVPGFSVSG SNSLPLFGPI RNDSSAKIHR PFGLGVPYDP DPDIKKPPPY 300 GAVMTGGLAL LNGNFSASKP LNGPLKTELP SLQYPVTDIS NWGTCPPPTP SLEAVDAYIQ 360 SPVSPTVQMQ SESFSPRNSG LLEALLHEAQ TLGSSRNRSS GNSSNLPVLT ATQAVDSSPL 420 NLCEVEWEYS DQISPLGHSA ASTLSESTPP ISSSSLDELP PSKALPGSEA KTETVEHVST 480 PEGGDKITRL DFSRPDALLG ADFFAQSYEY AKDLAAFISD DYFSDYKQMA AETTYSSTQG 540 WGLDEPMEHD CCL

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MSHSKANDSD DGMLDQSDGM LDQSDSSSFD EESSKVAGGG TVLKKGPWTA TEDAILIDYV  60
KKHGEGNWNA VQKHSGLFRC GKSCRLRWAN HLRPNLKKGA FTAEEERLII ELHAKMGNKW  120
ARMAAHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPDVHL QGLSESQQNQ NIGELNSGDT  180
SHHDLLQAND FDIPDVIFDN LKGSSGAFCY SPVMPNVSVN SMLNQSLGSS QSFSFMPPTI  240
NHVKRLGESE TLVPGFSVSG SNSLPLFGPI RNDSSAKIHR PFGLGVPYDP DPDIKKPPPY  300
GAVMTGGLAL LNGNFSASKP LNGPLKTELP SLQYPVTDIS NWGTCPPPTP SLEAVDAYIQ  360
SPVSPTVQMQ SESFSPRNSG LLEALLHEAQ TLGSSRNRSS GNSSNLPVLT ATQAVDSSPL  420
NLCEVEWEYS DQISPLGHSA ASTLSESTPP ISSSSLDELP PSKALPGSEA KTETVEHVST  480
PEGGDKITRL DFSRPDALLG ADFFAQSYEY AKDLAAFISD DYFSDYKQMA AETTYSSTQG  540
WGLDEPMEHD CCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	1e-104	MYB family protein