PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 198aa MW: 23155.9 Da PI: 6.866 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 122.8 | 3e-38 | 9 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 p G+rF P+d++l+++yLk+kv + +l++ ++ik+v ++y+++P+dL++ k++ +ekewyfF++r ky++g+ +nra + gyWk tg++++++ kg RWR75830.1 9 PSGYRFCPRDHQLINDYLKNKVMNLPLPC-DIIKDVvNLYDHNPQDLKEkpKISDDEKEWYFFTSRYDKYENGDPSNRASRCGYWKGTGTQQPITY-KG 105 89***************************.8899988**********84367888999**************************************.99 PP NAM 98 elvglkktLvfykgrapkgekt.dWvmheyrl 128 +++g k++Lvfy+++ p+g kt +W+++ey l RWR75830.1 106 NVIGYKTSLVFYENQPPQGIKThHWIIDEYML 137 9*******************9945******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MAHDGAQFPS GYRFCPRDHQ LINDYLKNKV MNLPLPCDII KDVVNLYDHN PQDLKEKPKI 60 SDDEKEWYFF TSRYDKYENG DPSNRASRCG YWKGTGTQQP ITYKGNVIGY KTSLVFYENQ 120 PPQGIKTHHW IIDEYMLDKI TSPGGVIEGR KRQKTNVADD NNKLDDDWVL CRIYESNNTQ 180 HYNDSNCNRM TLIAQLHI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-40 | NAC family protein |