PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75786.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 475aa MW: 52704.7 Da PI: 7.9168

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105	4.3e-33	109	163	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF+eav+qLGG++kAtPkt+l++m+++gLtl+h+kSHLQkYRl RWR75786.1 109 KPRLKWTPELHERFIEAVNQLGGADKATPKTVLRIMGIPGLTLYHLKSHLQKYRL 163 79****************************************************8 PP
2	Myb_DNA-binding	63.6	3.9e-20	111	162	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++++av+qlGg t+kt+ r mg g+tl+++ks++qky+ RWR75786.1 111 RLKWTPELHERFIEAVNQLGGAdkaTPKTVLRIMGiPGLTLYHLKSHLQKYR 162 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MGTLGGFKYQ IGNLRPQNSS SGYKDTGQPS SGFEDKEYLK GRSKSICQSN QVHRVAPYKG 60 ESKREEMYNH QGKTSFPSAR TSTLPDRHLF QQGTNLSGDT GLVLSTDAKP RLKWTPELHE 120 RFIEAVNQLG GADKATPKTV LRIMGIPGLT LYHLKSHLQK YRLSKNLHAQ SNAGNNKNGC 180 LAAANQMSEG NGPYSSNTNL GSQPSKNFQI SETLQMQIEV QRRLHEQLEV QRHLQLRIEA 240 QGKYLQSVLE KAQETLGRHN LGSAGLEAAK VQLSELVSKV SNECLNSAFS ELTEMPGLHT 300 QQTQTSQIAD CSMDSCLTTC DGSQKDHEIH NAGLSFRTFH GNAPSCAKET VEDSRVEDTE 360 GAWCGNQIER KRCYSEKVIF PVHSNSSDLS MSIRVPGEKR SSSTISEARR KEREAEVLLE 420 QQPQAKRSGF QLENEKSLEG FGLPYLTSQL DLNARNENDA SSCCKQFDLN GFSWG

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MGTLGGFKYQ IGNLRPQNSS SGYKDTGQPS SGFEDKEYLK GRSKSICQSN QVHRVAPYKG  60
ESKREEMYNH QGKTSFPSAR TSTLPDRHLF QQGTNLSGDT GLVLSTDAKP RLKWTPELHE  120
RFIEAVNQLG GADKATPKTV LRIMGIPGLT LYHLKSHLQK YRLSKNLHAQ SNAGNNKNGC  180
LAAANQMSEG NGPYSSNTNL GSQPSKNFQI SETLQMQIEV QRRLHEQLEV QRHLQLRIEA  240
QGKYLQSVLE KAQETLGRHN LGSAGLEAAK VQLSELVSKV SNECLNSAFS ELTEMPGLHT  300
QQTQTSQIAD CSMDSCLTTC DGSQKDHEIH NAGLSFRTFH GNAPSCAKET VEDSRVEDTE  360
GAWCGNQIER KRCYSEKVIF PVHSNSSDLS MSIRVPGEKR SSSTISEARR KEREAEVLLE  420
QQPQAKRSGF QLENEKSLEG FGLPYLTSQL DLNARNENDA SSCCKQFDLN GFSWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-129	G2-like family protein