PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75478.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 747aa    MW: 81047 Da    PI: 6.0413
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.18.3e-28222275155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +pr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  RWR75478.1 222 RPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILDLMNVERLTRENVASHLQKYRL 275
                 59*******************.********************************8 PP
2Myb_DNA-binding37.84.5e-12224274148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
       RWR75478.1 224 RVVWSVELHRKFVAAVNQLGIDkaVPKRILDLMNvERLTRENVASHLQKYR 274
                      678***********************************************7 PP
3Response_reg77.16.5e-26281361109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l vdD+p+ ++ll+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++ + + + +  Ga 
    RWR75478.1  28 ILAVDDDPTCLKLLETLLRRCEY-HVTTTGQAITALKMLRENKdkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTSAVMKGITHGAC 122
                   799********************.***************888888*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +eel +
    RWR75478.1 123 DYLLKPVRIEELKN 136
                   ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MAVEERRGRG VVGDDDASHY SFPVGMRILA VDDDPTCLKL LETLLRRCEY HVTTTGQAIT  60
ALKMLRENKD KFDLVISDVH MPDMDGFKLL ELVGLEMDLP VIMLSANSDT SAVMKGITHG  120
ACDYLLKPVR IEELKNIWQH VIRRRKTDHK DDNNSGHGDE GEKVRRGTGE GGLAPITAGP  180
ADPNGKLSKK RKDQDDDDDD DDDDEDSDEN GHVSEDPSAQ KRPRVVWSVE LHRKFVAAVN  240
QLGIDKAVPK RILDLMNVER LTRENVASHL QKYRLYLKRI SSVASQQANL AAVLGTKDLS  300
YLHMGSLDGF GDFHALSGSS QLPKAALSSF QGGGAFGRLN SPSGLGLHRL TSPGMIQLGR  360
PQNTGNYISD LGNFQRATHS GNPHGNLLQG MPHSLELDHL QPNKPVSCLG GLSSPIDDSP  420
LFPVGQQQLS GIGGFTDTGV ATCSSSNSFL NIPNNPLLQR HPRQGLSGRL GSQSSLTMAS  480
LNTEPIDVSV ASSSHLPDRR CNDTWQSGSP LAGYSANPLP MDAPFNSNDL SMANIPSMSS  540
HMEINPLNAS SSNMAVAAPL HESLLGRDLQ CQTSSLGVSV RCMPGEINEN MKFSNLGSMG  600
NCIGQNMNYT QKQLVEHKQD RTHNQNIGFS SPLNSFLPNH GVMGIVGLSS GQNNCNRKVD  660
TTLMGQSNPG TSFHMQQCDV GKLSADGAIN FKEDYLSENM KLGGGFNHSS CSSFDDLMSS  720
MIKRERDEMP LIDGGDMCDI FPLGTCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-129ARR-B family protein