PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75450.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 577aa MW: 63066 Da PI: 6.2488

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.6	1.5e-24	250	305	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D ynWrKYGqK+vkg e+ rsYYrCt+ +C+v+k v r+ ++v+e++Y+g+H+h+ RWR75450.1 250 DCYNWRKYGQKQVKGVECCRSYYRCTHFNCQVRKSVMRCY-SGNVIEVVYKGQHDHD 305 99************************************.9************7 PP
2	WRKY	103.7	9.9e-33	412	470	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vkg+++prsYY+Ct+ gC+v+k+ver+++d k+++itYeg+Hnhe RWR75450.1 412 LDDGYKWRKYGQKIVKGNPNPRSYYKCTYDGCQVRKHVERASDDAKALVITYEGKHNHE 470 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MARNQTSKPS KVEQEQEEEQ IHVKEEVIEE EGEEEEEEKS LLVRSILQPS CLVEEGSIRS 60 SVRETLTLPS PLSLQGNERD SSNFRPSFSN PLTGAVPSPA NSASGGPEAT SVPVFMLSGE 120 STADACRRFL SGSEATPVPV FMISGESSAE ACRSFLSGFQ GQFGMSHQEA LASVTAHAQM 180 KLQAAHPSLP SGLPLNSPIP SALSAFTPIP QPQKLQQLLN DSFSTREAEQ HRPFDQKPHS 240 THFAKASSGD CYNWRKYGQK QVKGVECCRS YYRCTHFNCQ VRKSVMRCYS GNVIEVVYKG 300 QHDHDPPQKI RYTRESRVLS SASLGESETA NHQGEEINGS KSLTPKTELY SGLATHEQQF 360 NSSSGCDVGT GIKVEYDDEP EPKRRITYST PPLKTTRDAK VVVQTGSDLG ILDDGYKWRK 420 YGQKIVKGNP NPRSYYKCTY DGCQVRKHVE RASDDAKALV ITYEGKHNHE RVASKNSYGS 480 YGPALLIAAA AALSAGGQLT TSNDLPAEES SVQFLSDRKD EVSEKALELG GEKALESAQT 540 LLSIGLNLNS SEAERGAKNS NVIERPFFNG NNAVVSV

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MARNQTSKPS KVEQEQEEEQ IHVKEEVIEE EGEEEEEEKS LLVRSILQPS CLVEEGSIRS  60
SVRETLTLPS PLSLQGNERD SSNFRPSFSN PLTGAVPSPA NSASGGPEAT SVPVFMLSGE  120
STADACRRFL SGSEATPVPV FMISGESSAE ACRSFLSGFQ GQFGMSHQEA LASVTAHAQM  180
KLQAAHPSLP SGLPLNSPIP SALSAFTPIP QPQKLQQLLN DSFSTREAEQ HRPFDQKPHS  240
THFAKASSGD CYNWRKYGQK QVKGVECCRS YYRCTHFNCQ VRKSVMRCYS GNVIEVVYKG  300
QHDHDPPQKI RYTRESRVLS SASLGESETA NHQGEEINGS KSLTPKTELY SGLATHEQQF  360
NSSSGCDVGT GIKVEYDDEP EPKRRITYST PPLKTTRDAK VVVQTGSDLG ILDDGYKWRK  420
YGQKIVKGNP NPRSYYKCTY DGCQVRKHVE RASDDAKALV ITYEGKHNHE RVASKNSYGS  480
YGPALLIAAA AALSAGGQLT TSNDLPAEES SVQFLSDRKD EVSEKALELG GEKALESAQT  540
LLSIGLNLNS SEAERGAKNS NVIERPFFNG NNAVVSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	6e-72	WRKY family protein