PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 366aa MW: 41337.2 Da PI: 6.0096 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.6 | 1e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl RWR75335.1 14 KGPWSAEEDTKLKAYIEQHGTGgNWIALPHKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 39 | 1.8e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd l+ ++ G++ W+ Ia+ ++ gRt++++k++w++ RWR75335.1 69 GGFSEEEDNLICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MGRAPCCDKA NVKKGPWSAE EDTKLKAYIE QHGTGGNWIA LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNLIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 RKESQMHRGF SASTQEGNEA NGMNDNSNLP ALSSSALERM QLQMQLQGLH NPFSFYNNPA 180 LWPKYHALGE KILQDQYNDF LIMQQGRISQ IQPDHNGTFE DIASPSFASL QENSLNRNHK 240 QEELENSLNG LASSSSSIAI EGGHESSGRA SAFIPYELEK SNMNFHMEAA LQPEFSDLLY 300 NKMGGFNGVE DQISELDCLK DMTGAKENMI WWANDFDTKS SSNSWDSSSV FQTQELFLDY 360 PMGYDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 6e-86 | MYB family protein |