PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 217aa MW: 24860.4 Da PI: 7.409 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.5 | 2.6e-19 | 78 | 132 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q Le+ F+++++++ e++eLA+kl+L+ rqV vWFqNrRa+ k RWR75268.1 78 RKKLRLSKDQSSLLEDSFKEHNTLTPMEKQELAEKLNLKPRQVEVWFQNRRARTK 132 778899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123 | 1.4e-39 | 78 | 166 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rlsk+q++lLE+sF+e+++L+p +K+ela++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eL+ + RWR75268.1 78 RKKLRLSKDQSSLLEDSFKEHNTLTPMEKQELAEKLNLKPRQVEVWFQNRRARTKLKQMEVDCEFLKRCCESLSEENRRLKKELQELK-S 166 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MEEEEICNTG LVLGIGPIGC GVSKKKCHLQ QKPPVQFHLL FPSVDEEQEV DGSSSKVTDE 60 GEDYGSRFGN DHERNHTRKK LRLSKDQSSL LEDSFKEHNT LTPMEKQELA EKLNLKPRQV 120 EVWFQNRRAR TKLKQMEVDC EFLKRCCESL SEENRRLKKE LQELKSIKLT SPFYIQLHKA 180 AATKISVCPS CERVAMNDGK IAKKEIFGAM EDSSMTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 83 | TRKKLRL |
2 | 127 | 135 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 8e-63 | HD-ZIP family protein |