PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75128.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 432aa MW: 48278.4 Da PI: 8.7538

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	7.7e-06	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H RWR75128.1 56 YVCEICSQGFQRDQNLQMHRRRH 78 9*********************9 PP
2	zf-C2H2	15.5	5e-05	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k H++t+ RWR75128.1 133 WVCDKCSKGYAVQSDYKAHLKTC 155 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MFASSSPPLV YNSSSTIPCM DNTSNNKRKR RPAGTPDPDA EVVSLSPKTL LESDRYVCEI 60 CSQGFQRDQN LQMHRRRHKV PWKLLKRETA EVRKRVYVCP EPSCLHHDPC HALGDLVGIK 120 KHFRRKHSNH KQWVCDKCSK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDA 180 CNGGRIRSKL QAPQPASLSR VGSSRSPTSE TNISATAWAT LKLPKLAPTV FLLPEQNQSA 240 IDPQLSLELQ LLPLSNSPSS TFDATISRAS DENSATRLQL SIGSTNSNSN SNMDPDQNSQ 300 KSIEEPSLAA SRLKEQAHEQ LRLAISEKAL AENARQEARR QIELAEQEFA NAKRIRLQAQ 360 VELDKARILK EHATKQMNAT LMQITCLACK QQFQPTTPTE ENSLVISYMS SAATEGEGEN 420 DNRIWQFQVA NT

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MFASSSPPLV YNSSSTIPCM DNTSNNKRKR RPAGTPDPDA EVVSLSPKTL LESDRYVCEI  60
CSQGFQRDQN LQMHRRRHKV PWKLLKRETA EVRKRVYVCP EPSCLHHDPC HALGDLVGIK  120
KHFRRKHSNH KQWVCDKCSK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDA  180
CNGGRIRSKL QAPQPASLSR VGSSRSPTSE TNISATAWAT LKLPKLAPTV FLLPEQNQSA  240
IDPQLSLELQ LLPLSNSPSS TFDATISRAS DENSATRLQL SIGSTNSNSN SNMDPDQNSQ  300
KSIEEPSLAA SRLKEQAHEQ LRLAISEKAL AENARQEARR QIELAEQEFA NAKRIRLQAQ  360
VELDKARILK EHATKQMNAT LMQITCLACK QQFQPTTPTE ENSLVISYMS SAATEGEGEN  420
DNRIWQFQVA NT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	32	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-152	C2H2 family protein