PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75076.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-X1

Protein Properties

Length: 1116aa MW: 121938 Da PI: 7.9766

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	20.9	7.8e-07	314	332	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C++ CH+G C++C+ RWR75076.1 314 CGRHFCERVCHPGACDSCQ 332 ******************7 PP
2	zf-NF-X1	17.5	8.8e-06	436	454	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C+++CHeG+C pC+ RWR75076.1 436 CGIHHCKEICHEGECAPCQ 454 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1116 aa Download sequence
MKSVAESSHS RHDRRSSGRT AGTGRQEWVP RGSTVVVNHN TSQNHPTANR AESSREETDR 60 NPNRNLILSS NDSRASNRGE SGRSPKANPP ILNSNDGRHQ SNSGRQQQQQ PSYYVVRKRE 120 EEVLESNVVP QLVQEIQDKL TKGAVECMIC YDMVRRSAAI WSCSSCYSIF HLNCIKKWAR 180 APTSIDLLAE KNQGLNWRCP GCQAVQLISS KEIRYTCFCG RRQDPPTDFY LTPHSCGEPC 240 MKPLDRETIN SSNGDENRCS HVCVLQCHPG PCPPCKAFAP PRPCPCGKKM ITRRCSDQNS 300 PLTCGQPCNR VLECGRHFCE RVCHPGACDS CQILVNASCF CKKKTELILC GDMAVKGEVK 360 EIDGLFSCNS LCENTLSCGN HNCGEICHPG SCGECEYLPK RIKTCYCGKT QLERVRENCL 420 DPIPTCTQVC GKVLRCGIHH CKEICHEGEC APCQVLVDQK CRCRSSARLV ECYVTVEQRD 480 GFVCDKPCGR KKNCGRHRCS ERCCPLSTSN NWSFGDWDPH LCQMTCGKKL RCGQHLCESL 540 CHSGHCPPCL ETIFSDLSCA CGKTVIPPPL PCGTPPPSCQ HLCAVPQACG HSSTHSCHFG 600 DCPPCSVPVA KECIGGHVVL RNIPCGSRDI RCNQLCGKTR QCGMHACART CHPPPCDSPC 660 GSALGSDSKA SCGQICGAPR RDCRHTCTAP CHPAAPCPDL RCNFPVTITC SCGRISATVP 720 CDAGGSASGF HVDTVFEASK LPVPLQPIEA NGKKISLGQR KLVCDEDCAK VERKRVLADA 780 FDITPPNLDA LHFGENYLVS EVIVDLFRRE PKWVLGVEER FKFMVLGKHR GGTTSSLRVH 840 VFCPTVKEKR DAIRLIAERW KLSVHAAGWE PKRFLVVHVT PKSKAPARIL GSKGSVPVGA 900 SHPPAFDPLI DMDPRLVVAL LDLPRDADIS ALVLRFGGEC ELVWLNDKNA LAVFSDPTRA 960 ATALRRLDHG SAYHGAVIVL QGGAASGSSA SNAWVGAKEA GTTMKGNSWK KAVVQESSWG 1020 DDSWDNNGVN ISVPLLKKGP PIATSRNRWN VLDPESRSNT SLQTDNSIEV LGRDGGLNER 1080 SAPLSEERAR SSSSACAENS GIEQLEEVED WEKAYG

Sequence ? help Back to Top

Protein Sequence Length: 1116 aa Download sequence

MKSVAESSHS RHDRRSSGRT AGTGRQEWVP RGSTVVVNHN TSQNHPTANR AESSREETDR  60
NPNRNLILSS NDSRASNRGE SGRSPKANPP ILNSNDGRHQ SNSGRQQQQQ PSYYVVRKRE  120
EEVLESNVVP QLVQEIQDKL TKGAVECMIC YDMVRRSAAI WSCSSCYSIF HLNCIKKWAR  180
APTSIDLLAE KNQGLNWRCP GCQAVQLISS KEIRYTCFCG RRQDPPTDFY LTPHSCGEPC  240
MKPLDRETIN SSNGDENRCS HVCVLQCHPG PCPPCKAFAP PRPCPCGKKM ITRRCSDQNS  300
PLTCGQPCNR VLECGRHFCE RVCHPGACDS CQILVNASCF CKKKTELILC GDMAVKGEVK  360
EIDGLFSCNS LCENTLSCGN HNCGEICHPG SCGECEYLPK RIKTCYCGKT QLERVRENCL  420
DPIPTCTQVC GKVLRCGIHH CKEICHEGEC APCQVLVDQK CRCRSSARLV ECYVTVEQRD  480
GFVCDKPCGR KKNCGRHRCS ERCCPLSTSN NWSFGDWDPH LCQMTCGKKL RCGQHLCESL  540
CHSGHCPPCL ETIFSDLSCA CGKTVIPPPL PCGTPPPSCQ HLCAVPQACG HSSTHSCHFG  600
DCPPCSVPVA KECIGGHVVL RNIPCGSRDI RCNQLCGKTR QCGMHACART CHPPPCDSPC  660
GSALGSDSKA SCGQICGAPR RDCRHTCTAP CHPAAPCPDL RCNFPVTITC SCGRISATVP  720
CDAGGSASGF HVDTVFEASK LPVPLQPIEA NGKKISLGQR KLVCDEDCAK VERKRVLADA  780
FDITPPNLDA LHFGENYLVS EVIVDLFRRE PKWVLGVEER FKFMVLGKHR GGTTSSLRVH  840
VFCPTVKEKR DAIRLIAERW KLSVHAAGWE PKRFLVVHVT PKSKAPARIL GSKGSVPVGA  900
SHPPAFDPLI DMDPRLVVAL LDLPRDADIS ALVLRFGGEC ELVWLNDKNA LAVFSDPTRA  960
ATALRRLDHG SAYHGAVIVL QGGAASGSSA SNAWVGAKEA GTTMKGNSWK KAVVQESSWG  1020
DDSWDNNGVN ISVPLLKKGP PIATSRNRWN VLDPESRSNT SLQTDNSIEV LGRDGGLNER  1080
SAPLSEERAR SSSSACAENS GIEQLEEVED WEKAYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein