PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75035.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 481aa MW: 52825.9 Da PI: 8.1834

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00071	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg s+++ ++ Hi + RWR75035.1 130 FECPVCGSSYRTEEEVSEHIEIC 152 89*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MEDVKDKFKG FIKKVSTSSS SSSGKFKGQG RVLGSSSSGP ASPSLSRPSQ TNAPKQEFNP 60 NTARAAQTNP PKQTNTSKQE SKQELPPRSP PPTAHPISAS SEHRSDGFDP FGSYISSGNR 120 APNGVSVSVF ECPVCGSSYR TEEEVSEHIE ICLSNGVENA RVGTRSMDKQ ADREGRNELV 180 GHVTVYKSSE PSDGSVEIVV KLLKNIAKEP NNEKFRRIRM SNPKIKEAIG GTPGGVELLE 240 CVGFRLLEDG GEMWAQMEAP SNEQILLINE AVTLLEPPKV EESSTVASST NKGPVEPKKI 300 DRQVRVFFSV PESVAAKIDL PDSFYNLSAQ ELKREADLRR KKLEESQLLI PKSYKEKQAQ 360 LARRRYKATV IRIQFPDGVV LQGVFLPWEP TTALYEFVSS ALKEQSLEFE LLQPAMPQRR 420 VIPRFPRAGQ KAPTLYEEEL VPSALVKFKP IETDSIVFTG LCNELLLASE PLTAATGVVL 480 P

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MEDVKDKFKG FIKKVSTSSS SSSGKFKGQG RVLGSSSSGP ASPSLSRPSQ TNAPKQEFNP  60
NTARAAQTNP PKQTNTSKQE SKQELPPRSP PPTAHPISAS SEHRSDGFDP FGSYISSGNR  120
APNGVSVSVF ECPVCGSSYR TEEEVSEHIE ICLSNGVENA RVGTRSMDKQ ADREGRNELV  180
GHVTVYKSSE PSDGSVEIVV KLLKNIAKEP NNEKFRRIRM SNPKIKEAIG GTPGGVELLE  240
CVGFRLLEDG GEMWAQMEAP SNEQILLINE AVTLLEPPKV EESSTVASST NKGPVEPKKI  300
DRQVRVFFSV PESVAAKIDL PDSFYNLSAQ ELKREADLRR KKLEESQLLI PKSYKEKQAQ  360
LARRRYKATV IRIQFPDGVV LQGVFLPWEP TTALYEFVSS ALKEQSLEFE LLQPAMPQRR  420
VIPRFPRAGQ KAPTLYEEEL VPSALVKFKP IETDSIVFTG LCNELLLASE PLTAATGVVL  480
P