PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 28455.5 Da PI: 5.5195 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.2e-15 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++++++G g W++++ + g++R+ k+c++rw++yl RWR75023.1 8 KGAWTEEEDILLTKCIEKFGVGKWSRVPLMAGLRRCHKSCRLRWLNYL 55 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.3e-15 | 61 | 106 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l RWR75023.1 61 RGEFKEDEVDLIIKLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNSHL 106 8999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEHLGVRKGA WTEEEDILLT KCIEKFGVGK WSRVPLMAGL RRCHKSCRLR WLNYLKPDIK 60 RGEFKEDEVD LIIKLHKLLG NRWSLIAGRL PGRTANDVKN YWNSHLSKRI SMQKGEQSQI 120 KSMETTAIAT TKVIRPQPRT FSPNSKWLSG TAGSSTIQTE LQKMPNNAMM GSPQEESALW 180 WKSLLGDGEE EEEEEDTWWS KSGKFGLEVE LPQIFGVEEM EKMEKKEEEG LGEWDNMLLD 240 FDLLSEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-63 | MYB family protein |