PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74798.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 296aa MW: 34123.8 Da PI: 7.1021

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	7.8e-36	41	133	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+ +++++sw e+ n+fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++i+ RWR74798.1 41 FLTKTYQLVDDPCTDHIVSWGEEDNTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGEKHLLSEIH 128 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+ks+ RWR74798.1 129 RRKSS 133 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MGDHQKVFVF CCAGVGMAFL VERCGEMVVC EESNKAVPAP FLTKTYQLVD DPCTDHIVSW 60 GEEDNTFVVW RPPEFARDLL PNYFKHNNFS SFVRQLNTYG FRKIVADRWE FANEFFRKGE 120 KHLLSEIHRR KSSHISQQTH QQHFHDPPSL LTSEEMGLWI ESPLPSPTLE SDFLSALSED 180 NQRLRRRNSI LLSELTHMKR LYNDIVYFLQ HHVTPVPLDQ RPMILGPRPI SMGPSLQAQS 240 HLGLQAFKSR GSASRSVTIS EEPNSTVKLF GVPLHGKKRL HQEMINSEEK EHAFLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	2e-85	HSF family protein