PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74691.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 475aa    MW: 53067.1 Da    PI: 6.1979
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.53.2e-139494691373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++vs+g+l +a+ +L+++s laspdgd+mqR+aayfteALa r+++s+ +lykal++++ +  ++see+ +++lf++++P+l++++++ N
  RWR74691.1  49 LIQLLFSCATHVSTGSLDNANVCLEQISLLASPDGDSMQRVAAYFTEALADRILKSWRGLYKALNSTRIQ--SVSEEFLVRRLFFDLCPFLRLAFVISN 145
                 689*************************************************************998887..69************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI+ea++ge++vHiiD++  +++QW+aLl+aL+ Rp+gpp+lRiTg+++    +ke le+t++ L++ Ae+l++pf+fn+ v+ +le+l+le+Lr+k+
  RWR74691.1 146 QAIVEAIQGEKMVHIIDLNSAEPAQWLALLEALSIRPDGPPHLRITGIHE----QKEVLEQTAKVLTEKAEKLDIPFQFNP-VVCKLEKLNLESLRIKT 239
                 **************************************************....9**************************.6888************* PP

        GRAS 199 gEalaVnlvlqlhrll.......................................................desvsleserdevLklvkslsPkvvvvv 242
                 gEala++++lqlh+ll                                                       ++s +++ + + +L  +++lsPk+vvv+
  RWR74691.1 240 GEALAISSILQLHSLLapdndghqkamtpsssmcmnsiqvqqilqrnqstlgeliekdnmfnghnpspdsaSSSPASAAKMECFLASLWGLSPKIVVVA 338
                 ********************************************************************998444444446999**************** PP

        GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
                 eqe++hn+++++er+lea+++y +lfd+le++++r+s +r+kvE++l+g+ei+n++acega+r++rhe+l+kW +rl+ aGF++v ls++a +qa++ll
  RWR74691.1 339 EQESNHNGSTLMERLLEAIHFYGTLFDCLESTVSRASIDRMKVEKMLFGEEIKNIIACEGADRKKRHEKLRKWTQRLDLAGFGKVGLSYYALSQARRLL 437
                 *************************************************************************************************** PP

        GRAS 342 rkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 + ++ +gyr++ee+g+ +++W+dr+L+svSaW
  RWR74691.1 438 QSYGCEGYRIKEENGACIICWQDRALFSVSAW 469
                 ******************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MVEMVQDEGS SSVSLSPLEL FSMLSISPGL GSPFPWLREM KSEERGLCLI QLLFSCATHV  60
STGSLDNANV CLEQISLLAS PDGDSMQRVA AYFTEALADR ILKSWRGLYK ALNSTRIQSV  120
SEEFLVRRLF FDLCPFLRLA FVISNQAIVE AIQGEKMVHI IDLNSAEPAQ WLALLEALSI  180
RPDGPPHLRI TGIHEQKEVL EQTAKVLTEK AEKLDIPFQF NPVVCKLEKL NLESLRIKTG  240
EALAISSILQ LHSLLAPDND GHQKAMTPSS SMCMNSIQVQ QILQRNQSTL GELIEKDNMF  300
NGHNPSPDSA SSSPASAAKM ECFLASLWGL SPKIVVVAEQ ESNHNGSTLM ERLLEAIHFY  360
GTLFDCLEST VSRASIDRMK VEKMLFGEEI KNIIACEGAD RKKRHEKLRK WTQRLDLAGF  420
GKVGLSYYAL SQARRLLQSY GCEGYRIKEE NGACIICWQD RALFSVSAWS CRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein