PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74498.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CAMTA

Protein Properties

Length: 1093aa MW: 121580 Da PI: 5.351

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174.8	1.2e-54	14	128	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwlk+ e++ iL+n+e ltl+++++p+sg+l+L+nr+++r+frkDGysw+kkkdg+tv E+he+LKvg+v++l+cyYah+e+np+fqrrcyw RWR74498.1 14 QEaQSRWLKPAEVYYILQNHETCPLTLKAPQNPPSGALFLFNRRVLRFFRKDGYSWRKKKDGRTVGEAHERLKVGNVDALNCYYAHGEQNPNFQRRCYW 112 5669********************************************************************************************* PP CG-1 101 lLeeelekivlvhyle 116 +L+ ++++ivlvhy+e RWR74498.1 113 MLDPARDHIVLVHYRE 128 ************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1093 aa Download sequence
MTMQSGFDIS KLFQEAQSRW LKPAEVYYIL QNHETCPLTL KAPQNPPSGA LFLFNRRVLR 60 FFRKDGYSWR KKKDGRTVGE AHERLKVGNV DALNCYYAHG EQNPNFQRRC YWMLDPARDH 120 IVLVHYREIT EGRPSNGSTS HSSPESFSNF SQSAEYCSAQ HLGSSSGITE VYEPYQSPFS 180 PSSVEEVSST IVGGKNFMDR ADGMDRSRGF GLPSYPVVNQ VLQRLTKELS LGDDDSSMYF 240 EKLPPDYSQS EKPHDSGFLA CESELSKPDE RLNLPLERKC GEEAQWIIGN DGVQDDAENM 300 LRNSDDTVDQ KESLSWKEML ELSSSSTGVN SQNQTSDGLA LNGVPNPSTK GIEYEAAHHS 360 KDATSLEHAS LSIPERVNSC MDSAAQPEKL ICQWQDLEGK DGTNGMDCHQ TSKNNFNLEL 420 TAAKQFLLGS DDTIISPASG KFLQDSETSV HSTYSSGTST LDTNSGMRML KKTNSVDWME 480 TRNISIDKYT PDYYEAWFDQ ESHLGTTTLE ADSGLTIAQK QRFSIREISP EWAYATEGTK 540 LIIVGDFLCD PLECAWGCMV GDIEVPIEVI QAGVILCQAP QHTPGKVTLC ITSGNRESCS 600 EVREFEYRIK PTSSALDNNL PEKDANKSTE LLLLARFAQT LLLGHDSSSV QIESNVEWES 660 NALRKPKMDD DTWGQIMEAL LVGSESLSNI MDCILQELLK DKLQQWLSSK CREGEVTASS 720 LSKEEQGIIH MIAGLGYEWA LNSILDAGIG INFRDVNGWT ALHWAARFGR EKMVAELLAA 780 GAFAGAVTDP TPQDPVGKNP ASIAAAWGHK GLAGYLSEVA LTSHLSSLTL KESEISKGSA 840 AVEAERTVEI VSDKSIQIPN GAVEDQLSLQ DSLAAVRNAA LAAARIQAAF RAHSFRRRHQ 900 SADASCDEYG LTADDIHGLS AASKFHGLRD HKLNTAALSI QKKYRGWKRR KEYLTLRQNV 960 VKIQAHVRGH QVRKKYREFL WTVGVLEKAV LRWRRKGVGL RGFRAEPGPI DESEDDDILK 1020 VFRKQKVDAA VDEAMSRVLS VVESPSARQQ YRRLLESYRR AKAQSSSNNG ETSSSQVNDN 1080 IENITDDEMY YFA

Sequence ? help Back to Top

Protein Sequence Length: 1093 aa Download sequence

MTMQSGFDIS KLFQEAQSRW LKPAEVYYIL QNHETCPLTL KAPQNPPSGA LFLFNRRVLR  60
FFRKDGYSWR KKKDGRTVGE AHERLKVGNV DALNCYYAHG EQNPNFQRRC YWMLDPARDH  120
IVLVHYREIT EGRPSNGSTS HSSPESFSNF SQSAEYCSAQ HLGSSSGITE VYEPYQSPFS  180
PSSVEEVSST IVGGKNFMDR ADGMDRSRGF GLPSYPVVNQ VLQRLTKELS LGDDDSSMYF  240
EKLPPDYSQS EKPHDSGFLA CESELSKPDE RLNLPLERKC GEEAQWIIGN DGVQDDAENM  300
LRNSDDTVDQ KESLSWKEML ELSSSSTGVN SQNQTSDGLA LNGVPNPSTK GIEYEAAHHS  360
KDATSLEHAS LSIPERVNSC MDSAAQPEKL ICQWQDLEGK DGTNGMDCHQ TSKNNFNLEL  420
TAAKQFLLGS DDTIISPASG KFLQDSETSV HSTYSSGTST LDTNSGMRML KKTNSVDWME  480
TRNISIDKYT PDYYEAWFDQ ESHLGTTTLE ADSGLTIAQK QRFSIREISP EWAYATEGTK  540
LIIVGDFLCD PLECAWGCMV GDIEVPIEVI QAGVILCQAP QHTPGKVTLC ITSGNRESCS  600
EVREFEYRIK PTSSALDNNL PEKDANKSTE LLLLARFAQT LLLGHDSSSV QIESNVEWES  660
NALRKPKMDD DTWGQIMEAL LVGSESLSNI MDCILQELLK DKLQQWLSSK CREGEVTASS  720
LSKEEQGIIH MIAGLGYEWA LNSILDAGIG INFRDVNGWT ALHWAARFGR EKMVAELLAA  780
GAFAGAVTDP TPQDPVGKNP ASIAAAWGHK GLAGYLSEVA LTSHLSSLTL KESEISKGSA  840
AVEAERTVEI VSDKSIQIPN GAVEDQLSLQ DSLAAVRNAA LAAARIQAAF RAHSFRRRHQ  900
SADASCDEYG LTADDIHGLS AASKFHGLRD HKLNTAALSI QKKYRGWKRR KEYLTLRQNV  960
VKIQAHVRGH QVRKKYREFL WTVGVLEKAV LRWRRKGVGL RGFRAEPGPI DESEDDDILK  1020
VFRKQKVDAA VDEAMSRVLS VVESPSARQQ YRRLLESYRR AKAQSSSNNG ETSSSQVNDN  1080
IENITDDEMY YFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-173	CAMTA family protein