PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74291.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 444aa MW: 49899.8 Da PI: 5.6968

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.4	1.2e-31	102	244	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWk 84 lp+G++F+P+d el+ + k+ g++ ++++ ++e +i++++P++Lp vk++ ++++fF++++++yatg+rk+r+ +++ +W+ RWR74291.1 102 LPAGVKFDPSDAELLEHLAGKRWLGNSkphvfIDEFIPtLNEDeGICYTHPENLP-GVKKDGSSVHFFHRTSNAYATGQRKRRKihrpctvsAEHVRWH 199 799**********655555566666566443332222333337******.7778889****************87888877777999 PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +tgk+k+v++ +g ++g kk++v+y ++r +k+ k++Wvmh+y+l RWR74291.1 200 KTGKTKPVIE-NGVHKGWKKIMVLYksSKRGSKPDKSNWVMHQYHL 244 ********.999*******4435777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MDVCGSSPDA GCSSRGEGVF PCFFFFFLLS CFCNSHKASS SSSSAMAKAW LIDSRGIARK 60 VKNATQFSTN QIKDIGAEAN RQCPNCSYRI DNSDVSIEWP GLPAGVKFDP SDAELLEHLA 120 GKRWLGNSKP HVFIDEFIPT LNEDEGICYT HPENLPGVKK DGSSVHFFHR TSNAYATGQR 180 KRRKIHRPCT VSAEHVRWHK TGKTKPVIEN GVHKGWKKIM VLYKSSKRGS KPDKSNWVMH 240 QYHLGTEEDE KEGEFVVSKV FYQQQSKQVT ENLIIEESDT LTVRASPKTP KTNPPQPRRS 300 EKHALYDETD EDKIQHLPVQ DAEFISKVPD CPLSSVHLGD ESLNPAWLAG ESQSVDDPNL 360 IDIDESLLCN EILDSFPPFD EPGLKHIPYF SDCSHRSEPI EQDLNSLSRI PDLDNIEVDT 420 PPDFQLADLQ FGSQESILGW LDRL

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MDVCGSSPDA GCSSRGEGVF PCFFFFFLLS CFCNSHKASS SSSSAMAKAW LIDSRGIARK  60
VKNATQFSTN QIKDIGAEAN RQCPNCSYRI DNSDVSIEWP GLPAGVKFDP SDAELLEHLA  120
GKRWLGNSKP HVFIDEFIPT LNEDEGICYT HPENLPGVKK DGSSVHFFHR TSNAYATGQR  180
KRRKIHRPCT VSAEHVRWHK TGKTKPVIEN GVHKGWKKIM VLYKSSKRGS KPDKSNWVMH  240
QYHLGTEEDE KEGEFVVSKV FYQQQSKQVT ENLIIEESDT LTVRASPKTP KTNPPQPRRS  300
EKHALYDETD EDKIQHLPVQ DAEFISKVPD CPLSSVHLGD ESLNPAWLAG ESQSVDDPNL  360
IDIDESLLCN EILDSFPPFD EPGLKHIPYF SDCSHRSEPI EQDLNSLSRI PDLDNIEVDT  420
PPDFQLADLQ FGSQESILGW LDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-94	NAC family protein