PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74201.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 634aa    MW: 72048.9 Da    PI: 10.4627
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.24.1e-1525112197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffk +     ++++ l+lp+ f+++ +g+k +  + +l+++ g+sW vk+  +++  + ++++GW +Fv+ ++L+ g+ +vF++dg++ f  +v vf
  RWR74201.1  25 FFKFM--LPGFSQK-LCLPRAFLKNLKGDK-C-DKAILNSSLGKSWHVKV--CGGNASKWFGDGWFDFVQGHDLQLGECLVFRYDGDMVF--YVIVF 112
                 66666..5556665.99******8888884.4.489**************..77777788**************************9999..77776 PP
2B358.61.1e-18222316197
                 EEEE-..-HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 f+k++++ +v+k      +++p +f +eh  +k e+++l l d++g+ Wev+++  ++ ++y l++GW++F +a++L+egD+++F+l+g+ +    v++
  RWR74201.1 222 FLKIMKNFSVGKCftcFVMTVPSSFSREHL-PK-EKVMLFLWDPKGKAWEVTFTPGNNCNGY-LSGGWSKFSRAHNLREGDVCIFELVGECQL--QVHI 315
                 66777777777665546689*********5.33.5689***************888888775.899*********************996665..7777 PP

                 E CS
          B3  97 f 97 
                 f
  RWR74201.1 316 F 316
                 6 PP
3B354.32.4e-17378467199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk +     ++++ l+lp  f+++ +g+k+   + +l+++ g+sW vk+  r+++  +++++GW +Fv+ +gL+ g+ +vF++dg++ f   v+vf++
  RWR74201.1 378 FFKFM--LPGFSEK-LSLPPAFLKHLMGNKRD--KAILKSPLGQSWHVKV--RGSKACMWFGDGWFDFVQGHGLQIGECLVFRYDGDMVF--SVTVFES 467
                 56666..5566665.********777888765..7***************..999888****************************9999..8888865 PP
4B355.11.4e-175516311699
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 l +p +f e++++++ ++  +t++d++grsW vk+ +r  +g++ +++GW++F   ngL++gD+++F++++++++ ++v+++r+
  RWR74201.1 551 LNIPAEFREANDLSTIQN--MTITDPKGRSWLVKI-VRVARGQVHFSSGWSQFQVTNGLQVGDVCIFEVTNTTKTAMNVRIIRR 631
                 78*********9997775..8888***********.799999999***********************99889999***99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 634 aa     Download sequence    
MLFQSMAPRP RKPSVMSQKK APIMFFKFML PGFSQKLCLP RAFLKNLKGD KCDKAILNSS  60
LGKSWHVKVC GGNASKWFGD GWFDFVQGHD LQLGECLVFR YDGDMVFYVI VFATSACEKR  120
LPVFKKDDKD DGKQRGTVDE KKTPLVREKV KDKGKQRGQH ASTVKINSFK KIKTEDGELP  180
MYKTDSVGAR HISKKQPSIA EEKRKAFEKA NAFSRASKFP NFLKIMKNFS VGKCFTCFVM  240
TVPSSFSREH LPKEKVMLFL WDPKGKAWEV TFTPGNNCNG YLSGGWSKFS RAHNLREGDV  300
CIFELVGECQ LQVHIFPWKM PAFALSKRLS NKAFYLYQNK TKLSTQMVTT RRAQSKGSTF  360
FKCMADGPRK SPQKVPMFFK FMLPGFSEKL SLPPAFLKHL MGNKRDKAIL KSPLGQSWHV  420
KVRGSKACMW FGDGWFDFVQ GHGLQIGECL VFRYDGDMVF SVTVFESSAC EKTLTVVKKD  480
DKDHEEQRGM EDEKKQPLLP MKQKDNGKEK GNVCKSLGAL GVKRFTSYEA KNPHFAARIV  540
PCNLIIARPY LNIPAEFREA NDLSTIQNMT ITDPKGRSWL VKIVRVARGQ VHFSSGWSQF  600
QVTNGLQVGD VCIFEVTNTT KTAMNVRIIR RFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.17e-24B3 family protein