PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74164.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Dof

Protein Properties

Length: 412aa MW: 44266.6 Da PI: 9.4686

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.7e-39	140	199	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++s RWR74164.1 140 HQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSTS 199 67899****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MSVALDGGLP AAARPALGCR CQAPSPVVFD CPHAARLQHS CRHGLGLRCA SRAFRTARAL 60 PQSSLSTPFS PTKPIHHHLT TIEREPPQTE ITKIEAIKMI QELLGGGGGV GEERKISMNG 120 GGTGGGAVEG SSSSSSSSDH QNLRCPRCDS SNTKFCYYNN YNLTQPRHFC KTCRRYWTKG 180 GALRNVPIGG GCRKNKSTSV PSGGGKSATG KAKSSSPEVG KPNSGNGFDH ELPSNPILWA 240 PHQNSQLLAL LRATQNPNPN PNSLMIKEEK VMIGSHMAPE SAVVTGALNA RNLGIDPMTQ 300 VPIGLSSSFW RNNHQQQQQQ QQQQHQQLLQ NQPQQHSLLM GEVPNTGFQD LYHRLRSTAN 360 YYDHSPVALN GATTSSTSSI LEPSPVVGGG QLGYWNSPFP WSDLPTTNGA FP

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MSVALDGGLP AAARPALGCR CQAPSPVVFD CPHAARLQHS CRHGLGLRCA SRAFRTARAL  60
PQSSLSTPFS PTKPIHHHLT TIEREPPQTE ITKIEAIKMI QELLGGGGGV GEERKISMNG  120
GGTGGGAVEG SSSSSSSSDH QNLRCPRCDS SNTKFCYYNN YNLTQPRHFC KTCRRYWTKG  180
GALRNVPIGG GCRKNKSTSV PSGGGKSATG KAKSSSPEVG KPNSGNGFDH ELPSNPILWA  240
PHQNSQLLAL LRATQNPNPN PNSLMIKEEK VMIGSHMAPE SAVVTGALNA RNLGIDPMTQ  300
VPIGLSSSFW RNNHQQQQQQ QQQQHQQLLQ NQPQQHSLLM GEVPNTGFQD LYHRLRSTAN  360
YYDHSPVALN GATTSSTSSI LEPSPVVGGG QLGYWNSPFP WSDLPTTNGA FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-32	Dof family protein