PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74145.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 356aa MW: 39948.6 Da PI: 7.8469

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.7	9.9e-32	217	272	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a+++LGG++ AtPk+i+elm v+gLt+++vkSHLQkYRl+ RWR74145.1 217 KQRRCWSPELHTRFVKALQELGGPQAATPKQIRELMRVDGLTNDEVKSHLQKYRLH 272 79****************************************************97 PP
2	Myb_DNA-binding	46.4	8.9e-15	219	270	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a ++lGg+ t+k I + m g+t ++ks++qky+ RWR74145.1 219 RRCWSPELHTRFVKALQELGGPqaaTPKQIRELMRvDGLTNDEVKSHLQKYR 270 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MRYGSSLCLD LEPSLAPKKF NELLRESVFI EDAKILTKMT ELMDALEEEK KKAESFKREL 60 PLTMILLNDA IEGMREMEIG LKKPVLKEFI SPVKTKTDEK MNWMSSAQLW SDNSCNKNKA 120 IDLKEQKEKE SEGYSFPGCK YSNGGGDFMP IKDFGFLSFT EDEKEPVFPS PDLTLLSPGI 180 KAPSGECDVD VGLNSKRDSG GLESSSASAQ SNLLPKKQRR CWSPELHTRF VKALQELGGP 240 QAATPKQIRE LMRVDGLTND EVKSHLQKYR LHNRRHTLPA TSSSTASNHR VVVLGEMLPP 300 SGHYEILKPI KSKFSSPKRF SLTFSEEDDG KPESCSRRGH LQGSSNEETR IMGIKT

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MRYGSSLCLD LEPSLAPKKF NELLRESVFI EDAKILTKMT ELMDALEEEK KKAESFKREL  60
PLTMILLNDA IEGMREMEIG LKKPVLKEFI SPVKTKTDEK MNWMSSAQLW SDNSCNKNKA  120
IDLKEQKEKE SEGYSFPGCK YSNGGGDFMP IKDFGFLSFT EDEKEPVFPS PDLTLLSPGI  180
KAPSGECDVD VGLNSKRDSG GLESSSASAQ SNLLPKKQRR CWSPELHTRF VKALQELGGP  240
QAATPKQIRE LMRVDGLTND EVKSHLQKYR LHNRRHTLPA TSSSTASNHR VVVLGEMLPP  300
SGHYEILKPI KSKFSSPKRF SLTFSEEDDG KPESCSRRGH LQGSSNEETR IMGIKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	5e-51	G2-like family protein