PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73785.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 334aa MW: 37943.6 Da PI: 8.0616

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	175	194	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ RWR73785.1 175 FSCPVCYKTFNRYNNMQMHM 194 89*****************9 PP
2	zf-C2H2	12.5	0.00044	259	281	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k F + + ++H +++ RWR73785.1 259 FMCRKCSKAFAVRGDWRTHEKNC 281 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MTDPYSNFFT GWYHYNFKPF FHPLTSSNPS PCLPSSSYNF YHHNNSSSNT SNCNSFLPSP 60 PPSPPLREAL PLLRLSPTRH EEEESSSSAM EICGERKKER DESFYSTVDD ETVTVALHIG 120 LPSPSAADLV SRVSSTEIIE KEEGNGVSGY PTSRVNKGQY WIPTPSQILI GPTQFSCPVC 180 YKTFNRYNNM QMHMWGHGSQ YRKGPESLRG TQPTAMLRLP CYCCAPGCRN NIDHPRSKPL 240 KDFRTLQTHY KRKHGIKPFM CRKCSKAFAV RGDWRTHEKN CGKLWYCICG SDFKHKRSLK 300 DHIKAFGNGH AAYGIDCFED DEPASEVEQD NESL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-134	C2H2 family protein