PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73767.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YA
Protein Properties Length: 399aa    MW: 44354.8 Da    PI: 9.4707
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.61.8e-32200256158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF
  RWR73767.1 200 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHQHAMRRARGNGGRF 256
                 69****************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MVSYLILRRN NKNPTDFFQP LSTKQSRSMH SKPDNANLTE PDAQGVPVAT ICSQPWWRGV  60
GYSVVTPAVL LDNSSKSSSL EMTEGGVGTK ASQLQADDGR NDGACVSKEM QNMSTQSDGR  120
FGYEQQQLQQ ATSTMPPVMA EYVVQHTQLE LGHSIACASY PYSDPYYGGV MAAYRAQALV  180
HPHVIGMHHT RMPLPLEMAE EPVYVNAKQY HGILRRRQSR AKAELEKKLI KVRKPYLHES  240
RHQHAMRRAR GNGGRFLNTK KVDSNGTQHN SEKKMGSGDS TPLQTASSSG SDPLHCNSTV  300
DSSSSKQEVK GPMMQDKREQ HTYANGNGRY QQHSSFPVSA FHSRSSERGE EGATLEWLLS  360
CDTIQSMACV ALEAWIVRQF ILGFVGFSVS KEKRDGKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.23e-55NF-YA family protein