PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR73767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YA | ||||||||
Protein Properties | Length: 399aa MW: 44354.8 Da PI: 9.4707 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.6 | 1.8e-32 | 200 | 256 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF RWR73767.1 200 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHQHAMRRARGNGGRF 256 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence |
MVSYLILRRN NKNPTDFFQP LSTKQSRSMH SKPDNANLTE PDAQGVPVAT ICSQPWWRGV 60 GYSVVTPAVL LDNSSKSSSL EMTEGGVGTK ASQLQADDGR NDGACVSKEM QNMSTQSDGR 120 FGYEQQQLQQ ATSTMPPVMA EYVVQHTQLE LGHSIACASY PYSDPYYGGV MAAYRAQALV 180 HPHVIGMHHT RMPLPLEMAE EPVYVNAKQY HGILRRRQSR AKAELEKKLI KVRKPYLHES 240 RHQHAMRRAR GNGGRFLNTK KVDSNGTQHN SEKKMGSGDS TPLQTASSSG SDPLHCNSTV 300 DSSSSKQEVK GPMMQDKREQ HTYANGNGRY QQHSSFPVSA FHSRSSERGE EGATLEWLLS 360 CDTIQSMACV ALEAWIVRQF ILGFVGFSVS KEKRDGKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 3e-55 | NF-YA family protein |