PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR73665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | LBD | ||||||||
Protein Properties | Length: 152aa MW: 16747.1 Da PI: 9.9098 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 109.7 | 2.2e-34 | 17 | 115 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++r+kC+ +C+lapyfp ++++f+nvhklFG+ n+lk+lk++++e +++m+++ ++A+ar dPv+G+++++++l+ q+e++++el++++e RWR73665.1 17 ACAACKHQRKKCS-NCPLAPYFPPGHSQQFENVHKLFGVGNLLKTLKSTNKEMWPTVMETIQFQADARRVDPVHGCLSIVRQLKAQIEETSKELEKTNE 114 7***********7.7********************************************************************************9998 PP DUF260 100 e 100 e RWR73665.1 115 E 115 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MSSREGKGGG ANNVNQACAA CKHQRKKCSN CPLAPYFPPG HSQQFENVHK LFGVGNLLKT 60 LKSTNKEMWP TVMETIQFQA DARRVDPVHG CLSIVRQLKA QIEETSKELE KTNEELSAES 120 MVGETPQIDI KPKNLAQPSA TSRKVRKGKS NA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 2e-31 | LBD family protein |