PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73653.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 370aa MW: 42081.5 Da PI: 4.999

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.4e-35	43	134	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+++++ed++++ ++sws+ nsf+v+d+++fa+++LpkyFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik RWR73653.1 43 FLTKTFDMVEDPATDLIVSWSQARNSFIVWDSHKFATNLLPKYFKHSNFSSFIRQLNTYGFRKVEPDR---------WEFANEGFLGGQKHLLRNIK 130 9***************************************************************99.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 rkk+ RWR73653.1 131 RKKH 134 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MFLQRKAMEG VKVKVEDMGG SSSSPTLSPQ PMEGLHDAGP PPFLTKTFDM VEDPATDLIV 60 SWSQARNSFI VWDSHKFATN LLPKYFKHSN FSSFIRQLNT YGFRKVEPDR WEFANEGFLG 120 GQKHLLRNIK RKKHVSQNMQ QQEMAACVEL GEFGLEGELD QLRRDRNVLM VEIVKLRQQQ 180 QTSQAQLVAM EERWLGTERK QQRMMAFLAR TLKNPSFVQR LIQRHERQRE LGGIGRKRRL 240 PANGCSENLQ QEVISQMGSQ IVSYAQKEQE ETTIRIDIDT IFSAIDHSAS NSIGNQNAEM 300 VDGSSDPNLD YASDLIWEDL LNEHFVVGDV GGGDLAEINV EVEDLAEKPS EWVDDVQVLV 360 EQMGFLVPTP

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MFLQRKAMEG VKVKVEDMGG SSSSPTLSPQ PMEGLHDAGP PPFLTKTFDM VEDPATDLIV  60
SWSQARNSFI VWDSHKFATN LLPKYFKHSN FSSFIRQLNT YGFRKVEPDR WEFANEGFLG  120
GQKHLLRNIK RKKHVSQNMQ QQEMAACVEL GEFGLEGELD QLRRDRNVLM VEIVKLRQQQ  180
QTSQAQLVAM EERWLGTERK QQRMMAFLAR TLKNPSFVQR LIQRHERQRE LGGIGRKRRL  240
PANGCSENLQ QEVISQMGSQ IVSYAQKEQE ETTIRIDIDT IFSAIDHSAS NSIGNQNAEM  300
VDGSSDPNLD YASDLIWEDL LNEHFVVGDV GGGDLAEINV EVEDLAEKPS EWVDDVQVLV  360
EQMGFLVPTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	2e-96	HSF family protein