PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73652.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 356aa MW: 40385.6 Da PI: 5.0807

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	55.8	1.2e-17	36	120	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+++++ed++++ ++sws+ nsf+v+d+++fa+k+LpkyFkh+ ++SF v+ + weF+++ F g+k+ll++ik RWR73652.1 36 FLTKTFDMVEDPTTDLIVSWSQARNSFIVWDSHKFATKLLPKYFKHK-CQSFQAS------PFVDP---------DRWEFANEGFLGGQKHLLRNIK 116 9*******************************************7.6888432......22333.........35****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 rk++ RWR73652.1 117 RKRH 120 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEGVKVKVED MGRSSSSPTL SPQPMEGLHD AGPPPFLTKT FDMVEDPTTD LIVSWSQARN 60 SFIVWDSHKF ATKLLPKYFK HKCQSFQASP FVDPDRWEFA NEGFLGGQKH LLRNIKRKRH 120 VSQNVQQQEM AACVELGEFG LEGELDQLRR DRNVLMVEIV KLRQQQQTSQ AQLVTMEERW 180 LGTERKQQRM MAFLAKTLKN PAFVQRLIQR RERQRELGGI GRKRRLPANG CLENLQQEVI 240 SQMGSQIMSY AQKEHEETTI RTDIDTVFSA IDHSASNSIG NQNAEMVDGS SDANLDYASD 300 LIWEDLLNEH FVVGDVGGGD LAKINVEVED LAEKPSEWGD DVQVLVEQMG FLVPTP

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEGVKVKVED MGRSSSSPTL SPQPMEGLHD AGPPPFLTKT FDMVEDPTTD LIVSWSQARN  60
SFIVWDSHKF ATKLLPKYFK HKCQSFQASP FVDPDRWEFA NEGFLGGQKH LLRNIKRKRH  120
VSQNVQQQEM AACVELGEFG LEGELDQLRR DRNVLMVEIV KLRQQQQTSQ AQLVTMEERW  180
LGTERKQQRM MAFLAKTLKN PAFVQRLIQR RERQRELGGI GRKRRLPANG CLENLQQEVI  240
SQMGSQIMSY AQKEHEETTI RTDIDTVFSA IDHSASNSIG NQNAEMVDGS SDANLDYASD  300
LIWEDLLNEH FVVGDVGGGD LAKINVEVED LAEKPSEWGD DVQVLVEQMG FLVPTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-76	HSF family protein