PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73651.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 495aa MW: 56878 Da PI: 6.5648

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.9	9.1e-35	183	274	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+++++ed++++ ++sws+ nsf+v+d+++fa+k+LpkyFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik RWR73651.1 183 FLTKTFDMVEDPTTDLIVSWSQARNSFIVWDSHKFATKLLPKYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLRNIK 270 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 rk++ RWR73651.1 271 RKRH 274 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MKINWNRIDA EFIHALLHQC SSLERLELTR CYLDGCDKEE FILSINAPHL KVLNIRGSYG 60 ISKNIAWKLV LINSPHLKRI DLEKLTFKDS HIIARELEIF HSFMKYEPPE MEAILNSIAH 120 VRVLRLSLPS NEHSIDSHLD MFLQRKAMEA VKVKVEDMGG SSSSPTLSPQ PMEGLHDAGP 180 PPFLTKTFDM VEDPTTDLIV SWSQARNSFI VWDSHKFATK LLPKYFKHSN FSSFIRQLNT 240 YGFRKVDPDR WEFANEGFLG GQKHLLRNIK RKRHVSQNMQ QQEIAACVEL GEFGLEGELH 300 QLRRDRNVLM VEIVKLKQQQ QTSQAQLVAM EERWLGTERK QQQMMAFLAR TLKNPAFVQR 360 LIQRRERQRE LGSIGRKRRL PANGCLENLQ KEEQEETTIR TDIDTVFSAI DHSASNSIRN 420 QNAEMVDGSS DPNLDYASDL IWEDLLNKHF VVGDVGGGDL AKINVEVEDL AEKPSEWGDD 480 VQVLVEQMGF LVLTP

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MKINWNRIDA EFIHALLHQC SSLERLELTR CYLDGCDKEE FILSINAPHL KVLNIRGSYG  60
ISKNIAWKLV LINSPHLKRI DLEKLTFKDS HIIARELEIF HSFMKYEPPE MEAILNSIAH  120
VRVLRLSLPS NEHSIDSHLD MFLQRKAMEA VKVKVEDMGG SSSSPTLSPQ PMEGLHDAGP  180
PPFLTKTFDM VEDPTTDLIV SWSQARNSFI VWDSHKFATK LLPKYFKHSN FSSFIRQLNT  240
YGFRKVDPDR WEFANEGFLG GQKHLLRNIK RKRHVSQNMQ QQEIAACVEL GEFGLEGELH  300
QLRRDRNVLM VEIVKLKQQQ QTSQAQLVAM EERWLGTERK QQQMMAFLAR TLKNPAFVQR  360
LIQRRERQRE LGSIGRKRRL PANGCLENLQ KEEQEETTIR TDIDTVFSAI DHSASNSIRN  420
QNAEMVDGSS DPNLDYASDL IWEDLLNKHF VVGDVGGGDL AKINVEVEDL AEKPSEWGDD  480
VQVLVEQMGF LVLTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	7e-97	HSF family protein