PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73649.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 226aa    MW: 26606.4 Da    PI: 11.2982
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind94.89.4e-305213610103
                   HCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  10 ledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103
                   led++++ ++ ws+  nsf+v+d+++fa+++Lpky khsnf+SF+RQLn+YgF+kv+ ++         weF+++ F  g+k+ll++ikr++++
    RWR73649.1  52 LEDPATDLIVAWSQARNSFIVWDSHKFATNLLPKYLKHSNFSSFIRQLNTYGFRKVNPDR---------WEFANEGFLGGQKHLLRNIKRRRHQ 136
                   899******************************************************999.........**********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MIPYTFKEEG HGRCESEGRR HGAEAVHPLP SRRSQWRGCT TPGRRRSRRR HLEDPATDLI  60
VAWSQARNSF IVWDSHKFAT NLLPKYLKHS NFSSFIRQLN TYGFRKVNPD RWEFANEGFL  120
GGQKHLLRNI KRRRHQQEMA ACVELGQFGL EGELDQLRRD RNVLMVGIVR LRQQQQTSQA  180
QLVAIEVQLL GTKRKQQWMM VLLDRFIRGG PHDHNFYYMK RSSPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-69HSF family protein