PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73439.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 569aa MW: 60826.7 Da PI: 7.844

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44	4.3e-14	102	140	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 + k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C N+ + RWR73439.1 102 KPKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCYNNAD 140 5699**********************.******987 PP
2	TCR	49.7	7.3e-16	186	225	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC +CkN e RWR73439.1 186 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCLECKNFE 225 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEQGLQSAAA PASVSAPVAS PVSASAPVAA PPDFPAKKLA RQLDFTTALC STAPTAAVAL 60 ETPMPVPQPL TLRPSLSTVV KVESPRSRPR PPFEVKDVTP KKPKQCNCKH SRCLKLYCEC 120 FASGIYCDGC NCVNCYNNAD NDAARQEAIG LTLERNPNAF RPKIASSPNA TRDRKDESGE 180 LPLIGKHNKG CHCKKSGCLK KYCECFQANI LCSENCKCLE CKNFEGSEER RALFHVDHGS 240 TLTYIQQAAN AALTGAIGTS GYASSPTLKR RKMQDPYFGT IKDPSVHRPG QFPQANMKTN 300 APSISLTSVP SARVVNPAVA GSSKVTYRSL LADIVQPEDV TDLCGRLVVA SVEAAKTLSE 360 RKVLEENQGG KDQMEVSLAS STREGNDCQR ELDVQKTEVD GRSNVVNQTD KMCTDESGSD 420 GADVQKGRPM SPGTLALMCD EQDTSFMASA SPSGAAGLGR GTPLRSPFGQ GMTEVYAEQE 480 RRVLTKFRET LQHLITLGNL KGSQFSSLAA QTETSHSELT GNSEGKAMAT AAGEASQVAN 540 VVTSNSLPPK VGHPVENGQF KLKTENMEM

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEQGLQSAAA PASVSAPVAS PVSASAPVAA PPDFPAKKLA RQLDFTTALC STAPTAAVAL  60
ETPMPVPQPL TLRPSLSTVV KVESPRSRPR PPFEVKDVTP KKPKQCNCKH SRCLKLYCEC  120
FASGIYCDGC NCVNCYNNAD NDAARQEAIG LTLERNPNAF RPKIASSPNA TRDRKDESGE  180
LPLIGKHNKG CHCKKSGCLK KYCECFQANI LCSENCKCLE CKNFEGSEER RALFHVDHGS  240
TLTYIQQAAN AALTGAIGTS GYASSPTLKR RKMQDPYFGT IKDPSVHRPG QFPQANMKTN  300
APSISLTSVP SARVVNPAVA GSSKVTYRSL LADIVQPEDV TDLCGRLVVA SVEAAKTLSE  360
RKVLEENQGG KDQMEVSLAS STREGNDCQR ELDVQKTEVD GRSNVVNQTD KMCTDESGSD  420
GADVQKGRPM SPGTLALMCD EQDTSFMASA SPSGAAGLGR GTPLRSPFGQ GMTEVYAEQE  480
RRVLTKFRET LQHLITLGNL KGSQFSSLAA QTETSHSELT GNSEGKAMAT AAGEASQVAN  540
VVTSNSLPPK VGHPVENGQF KLKTENMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-153	CPP family protein