PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR73350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 159aa MW: 18748.3 Da PI: 8.709 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.3 | 2.4e-09 | 21 | 132 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...tksgyWkatgkdkevlskk 96 Gf+F Pt e+ + + ++k +g++l+ +++e ++++++P++L+ e+y F+ + g++ nra ++ yWk+ k + v++ + RWR73350.1 21 FIGFHFLPTYEDGI-RIVNNKNAGRELPP--IFNEYrRLFQCQPKQLE--------ECYCFTDVAVI---GNKVNRAlgeDSRYYWKNINK-EFVKDDN 104 68************.77999999999777..5666669*********6........89***998775...556666522145789**9877.6777779 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127 ++++g+ + Lv++k k + t+W + eyr RWR73350.1 105 NTVIGCVTKLVLHKD---KNTPTEWHILEYR 132 999**********43...3356********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MASRRNAFSS MIDHRLNPDL FIGFHFLPTY EDGIRIVNNK NAGRELPPIF NEYRRLFQCQ 60 PKQLEECYCF TDVAVIGNKV NRALGEDSRY YWKNINKEFV KDDNNTVIGC VTKLVLHKDK 120 NTPTEWHILE YRDRKTADAG RWVLCQIYKR EKNNDNVTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 1e-06 | NAC family protein |