PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73314.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HB-other
Protein Properties Length: 366aa    MW: 41158.4 Da    PI: 5.2666
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.44.4e-07298345754
                 --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 ++k  le+L++++ +++ p+ +++  + + ++L+ ++V  WF  +R+ 
  RWR73314.1 298 LKKVHLETLQKVYSRTKRPTNAMISSIVHVTRLPWKRVVKWFEDKRQE 345
                 567789****************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MATAAAVAAS SSSLLFRVLP AASCNNSNGR IQSTSHLFLG TSRTSPFLHP FLPCRSVLAF  60
SRSKRNNAPT PTSAKTKKSL QDDYGEEDDL DGDALEALFS QLEEDLKIDG LSTNDTDDEI  120
SEEDMARLEQ ELEEAFGDGS EDELAGTTHS NMENIDGYDD DTDDDEEEER PLNLRTWQLR  180
RLAAALKIGR RKTSIKNLAG ELGLDRAVVL ELLREPPPDL LLMCASLPDL QRPPEPKSKP  240
FESSPVVTAE SKPLEASPKT MTESKHVEPS IVNVAKPKNV VKEPIHVVRK RWFMQKRLKK  300
VHLETLQKVY SRTKRPTNAM ISSIVHVTRL PWKRVVKWFE DKRQEEGIPE ERLPYRRSMP  360
ETVSTD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16478KRNNAPTPTSAKTKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.19e-48HB-other family protein