PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR73145.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 35816.5 Da PI: 4.5924 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.1 | 2.7e-15 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ + G g+W+ +ar g+ R++k+c++rw +yl RWR73145.1 18 KGLWSPEEDEKLMNYMLMNGQGCWSDVARNAGLQRCGKSCRLRWINYL 65 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 9.6e-16 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +E++l+++++ lG++ W+ Ia++++ gRt++++k++w++ RWR73145.1 71 RGAFSSQEEDLIIQLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 114 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MKNPDHNGND SNKKKLRKGL WSPEEDEKLM NYMLMNGQGC WSDVARNAGL QRCGKSCRLR 60 WINYLRPDLK RGAFSSQEED LIIQLHSILG NRWSQIAARL PGRTDNEIKN FWNSTIKKRL 120 RNSSSSSLSL FSPNNSDSSE PREAMGGFTS ISDHDIMTMC MDSSSSTPVQ AVSSLCNRFD 180 LQFDPLPCPE NVYDMTDFVT GYHMTPYLTQ VGFDGGFNGN HGIYGTIQMG EQDEIYVPPL 240 LESGSLEEHA ITNNISDTHT NDNNKYKNNN NTNTTNNNNI EEEDLFGNEN YWDTENLRMV 300 ELDLEDLMGN ISSTFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 5e-68 | MYB family protein |