PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR73109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 27910.6 Da PI: 9.5891 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.3 | 4.5e-51 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+e+d++k++P+dLp +++e yfF++r+ ky++g+r+nrat sgyWkatg dk+++++ +++ RWR73109.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPEIDVCKFDPSDLP---GDSNQERYFFTTREAKYPNGNRPNRATGSGYWKATGLDKRIVTSrSNQ 108 79****************************.89***************...3467899********************************999885777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk+Lvfy+g+ap+g++tdW+mheyrl RWR73109.1 109 VVGMKKVLVFYRGKAPNGSRTDWIMHEYRL 138 8***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 248 aa Download sequence |
MEKMSFVKDG VVRLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPEID VCKFDPSDLP 60 GDSNQERYFF TTREAKYPNG NRPNRATGSG YWKATGLDKR IVTSRSNQVV GMKKVLVFYR 120 GKAPNGSRTD WIMHEYRLAD AAGGRGCIVP QRKNSTQNAM MQMEDWVLCR IFLKKRSEKT 180 DVEITQPSNN YRSRNLGVPR ISFIDFMGRE AAASSDSSSI TEISSAGPRN EEINSCNSFS 240 SSPCGREA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 6e-88 | NAC family protein |